Complex 5ibb
System information
Experimental technique | X-ray |
Experimental resolution | 2.96 |
System mass | 4568.55 kDa |
Deposition year | 2016 |
Molecule type | RNA/Protein |
# RNA entities | 5 |
Organism | Thermus |
RCSB PDB Entry | 5ibb |
Reference | Rozov Alexey, Westhof Eric, Yusupov Marat, Yusupova Gulnara. . The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix Nucleic Acids Research |
Compound | SPE |
Residue | . / 1733 |
Chain | UKA / 1G |
Non-redundant | True |
Interacting RNA chains | DB/1G |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPE |
Residue | . / 3446 |
Chain | KCB / 14 |
Non-redundant | True |
Interacting RNA chains | CC/14 |
Volume | 868.13 Å3 |
Hydrophobicity | 0.068 |
Hydrophilicity | 1.341 |
Buriedness | 0.755 |
Don/acc character | 2.159 |
SiteScore | 1.038 |
D Score | 0.956 |
Compound | SPE |
Residue | . / 208 |
Chain | TCB / 1J |
Non-redundant | True |
Interacting RNA chains | CC/14, DC/1J |
Volume | 410.57 Å3 |
Hydrophobicity | 0.224 |
Hydrophilicity | 1.029 |
Buriedness | 0.726 |
Don/acc character | 3.973 |
SiteScore | 1.018 |
D Score | 1.036 |