Complex 5j8a
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.10 |
| System mass | 4274.60 kDa |
| Deposition year | 2016 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 5j8a |
| Reference | Cocozaki Alexis I., Altman Roger B., Huang Jian, Buurman Ed T., Kazmirski Steven L., Doig Peter, Prince D. Bryan, Blanchard Scott C., Cate Jamie H. D., Ferguson Andrew D.. . Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors Proceedings of the National Academy of Sciences |
| Compound | 1PE |
| Residue | . / 3185 |
| Chain | RW / DA |
| Non-redundant | True |
| Interacting RNA chains | AD/DA |
| Volume | 80.95 Å3 |
| Hydrophobicity | 0.017 |
| Hydrophilicity | 1.177 |
| Buriedness | 0.596 |
| Don/acc character | 1.704 |
| SiteScore | 0.632 |
| D Score | 0.530 |
| Compound | 1PE |
| Residue | . / 3202 |
| Chain | IX / DA |
| Non-redundant | True |
| Interacting RNA chains | AD/DA |
| Volume | 328.59 Å3 |
| Hydrophobicity | 0.411 |
| Hydrophilicity | 0.885 |
| Buriedness | 0.705 |
| Don/acc character | 3.153 |
| SiteScore | 1.099 |
| D Score | 0.964 |
| Compound | PG4 |
| Residue | . / 1670 |
| Chain | SF / AA |
| Non-redundant | False |
| Interacting RNA chains | A/AA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | PG4 |
| Residue | . / 1642 |
| Chain | VH / BA |
| Non-redundant | True |
| Interacting RNA chains | BA/BA |
| Volume | 46.99 Å3 |
| Hydrophobicity | 0.017 |
| Hydrophilicity | 0.619 |
| Buriedness | 0.472 |
| Don/acc character | 3.956 |
| SiteScore | 1.069 |
| D Score | 1.007 |
| Compound | PG4 |
| Residue | . / 202 |
| Chain | XO / DS |
| Non-redundant | True |
| Interacting RNA chains | AD/DA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | PG4 |
| Residue | . / 3193 |
| Chain | ZW / DA |
| Non-redundant | True |
| Interacting RNA chains | AD/DA |
| Volume | 162.58 Å3 |
| Hydrophobicity | 0.338 |
| Hydrophilicity | 0.864 |
| Buriedness | 0.601 |
| Don/acc character | 1.308 |
| SiteScore | 0.858 |
| D Score | 0.877 |
| Compound | PG4 |
| Residue | . / 3216 |
| Chain | WX / DA |
| Non-redundant | True |
| Interacting RNA chains | AD/DA |
| Volume | 230.84 Å3 |
| Hydrophobicity | 0.347 |
| Hydrophilicity | 0.766 |
| Buriedness | 0.665 |
| Don/acc character | 0.584 |
| SiteScore | 0.875 |
| D Score | 0.698 |
| Compound | T1C |
| Residue | . / 1680 |
| Chain | CG / AA |
| Non-redundant | False |
| Interacting RNA chains | A/AA |
| Volume | 237.01 Å3 |
| Hydrophobicity | 0.316 |
| Hydrophilicity | 1.075 |
| Buriedness | 0.762 |
| Don/acc character | 1.761 |
| SiteScore | 0.983 |
| D Score | 0.778 |
| Compound | T1C |
| Residue | . / 1643 |
| Chain | WH / BA |
| Non-redundant | True |
| Interacting RNA chains | BA/BA |
| Volume | 216.09 Å3 |
| Hydrophobicity | 0.362 |
| Hydrophilicity | 1.034 |
| Buriedness | 0.738 |
| Don/acc character | 2.780 |
| SiteScore | 1.036 |
| D Score | 0.863 |