Complex 5j8a
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.10 |
| System mass | 4274.60 kDa |
| Deposition year | 2016 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Escherichia |
| RCSB PDB Entry | 5j8a |
| Reference | Cocozaki Alexis I., Altman Roger B., Huang Jian, Buurman Ed T., Kazmirski Steven L., Doig Peter, Prince D. Bryan, Blanchard Scott C., Cate Jamie H. D., Ferguson Andrew D.. . Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors Proceedings of the National Academy of Sciences |
| Compound | 1PE |
| Residue | . / 3202 |
| Chain | IX / DA |
| Non-redundant | False |
| Interacting RNA chains | AD/DA |
| Volume | 323.79 Å3 |
| Hydrophobicity | 0.223 |
| Hydrophilicity | 1.154 |
| Buriedness | 0.710 |
| Don/acc character | 2.764 |
| SiteScore | 0.966 |
| D Score | 0.936 |
| Compound | PG4 |
| Residue | . / 1670 |
| Chain | SF / AA |
| Non-redundant | False |
| Interacting RNA chains | A/AA |
| Volume | 2.40 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.337 |
| Buriedness | 0.533 |
| Don/acc character | 4.800 |
| SiteScore | 0.284 |
| D Score | 0.047 |
| Compound | PG4 |
| Residue | . / 1642 |
| Chain | VH / BA |
| Non-redundant | False |
| Interacting RNA chains | BA/BA |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | PG4 |
| Residue | . / 3216 |
| Chain | WX / DA |
| Non-redundant | False |
| Interacting RNA chains | AD/DA |
| Volume | 234.95 Å3 |
| Hydrophobicity | 0.410 |
| Hydrophilicity | 0.810 |
| Buriedness | 0.666 |
| Don/acc character | 0.725 |
| SiteScore | 0.736 |
| D Score | 0.708 |
| Compound | T1C |
| Residue | . / 1680 |
| Chain | CG / AA |
| Non-redundant | False |
| Interacting RNA chains | A/AA |
| Volume | 208.89 Å3 |
| Hydrophobicity | 0.291 |
| Hydrophilicity | 1.160 |
| Buriedness | 0.722 |
| Don/acc character | 1.534 |
| SiteScore | 0.822 |
| D Score | 0.746 |
| Compound | T1C |
| Residue | . / 1643 |
| Chain | WH / BA |
| Non-redundant | False |
| Interacting RNA chains | BA/BA |
| Volume | 188.99 Å3 |
| Hydrophobicity | 0.319 |
| Hydrophilicity | 1.139 |
| Buriedness | 0.693 |
| Don/acc character | 1.885 |
| SiteScore | 0.868 |
| D Score | 0.820 |