Complex 5j7l
System information
Experimental technique | X-ray |
Experimental resolution | 3.00 |
System mass | 4272.87 kDa |
Deposition year | 2016 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Escherichia |
RCSB PDB Entry | 5j7l |
Reference | Cocozaki Alexis I., Altman Roger B., Huang Jian, Buurman Ed T., Kazmirski Steven L., Doig Peter, Prince D. Bryan, Blanchard Scott C., Cate Jamie H. D., Ferguson Andrew D.. . Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors Proceedings of the National Academy of Sciences |
Compound | 1PE |
Residue | . / 3202 |
Chain | KX / DA |
Non-redundant | False |
Interacting RNA chains | AD/DA |
Volume | 323.45 Å3 |
Hydrophobicity | 0.159 |
Hydrophilicity | 1.205 |
Buriedness | 0.711 |
Don/acc character | 2.948 |
SiteScore | 1.008 |
D Score | 0.974 |
Compound | PG4 |
Residue | . / 1670 |
Chain | SF / AA |
Non-redundant | False |
Interacting RNA chains | A/AA |
Volume | 2.40 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.203 |
Buriedness | 0.534 |
Don/acc character | 5.707 |
SiteScore | 0.261 |
D Score | 0.061 |
Compound | PG4 |
Residue | . / 1642 |
Chain | WH / BA |
Non-redundant | False |
Interacting RNA chains | BA/BA |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PG4 |
Residue | . / 3216 |
Chain | YX / DA |
Non-redundant | False |
Interacting RNA chains | AD/DA |
Volume | 345.06 Å3 |
Hydrophobicity | 0.309 |
Hydrophilicity | 0.931 |
Buriedness | 0.675 |
Don/acc character | 0.885 |
SiteScore | 0.797 |
D Score | 0.773 |
Compound | TAC |
Residue | . / 1680 |
Chain | CG / AA |
Non-redundant | False |
Interacting RNA chains | A/AA |
Volume | 191.74 Å3 |
Hydrophobicity | 0.210 |
Hydrophilicity | 1.081 |
Buriedness | 0.709 |
Don/acc character | 1.587 |
SiteScore | 0.771 |
D Score | 0.710 |
Compound | TAC |
Residue | . / 1643 |
Chain | XH / BA |
Non-redundant | False |
Interacting RNA chains | BA/BA |
Volume | 185.56 Å3 |
Hydrophobicity | 0.181 |
Hydrophilicity | 1.075 |
Buriedness | 0.684 |
Don/acc character | 1.378 |
SiteScore | 0.816 |
D Score | 0.776 |