Complex 5ib7
System information
Experimental technique | X-ray |
Experimental resolution | 2.99 |
System mass | 4540.51 kDa |
Deposition year | 2016 |
Molecule type | RNA/Protein |
# RNA entities | 5 |
Organism | Thermus |
RCSB PDB Entry | 5ib7 |
Reference | Rozov Alexey, Westhof Eric, Yusupov Marat, Yusupova Gulnara. . The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix Nucleic Acids Research |
Compound | PAR |
Residue | . / 1702 |
Chain | ZHA / 1G |
Non-redundant | False |
Interacting RNA chains | EB/1G |
Volume | 576.24 Å3 |
Hydrophobicity | 0.085 |
Hydrophilicity | 1.152 |
Buriedness | 0.651 |
Don/acc character | 2.178 |
SiteScore | 0.968 |
D Score | 0.955 |
Compound | SPE |
Residue | . / 1703 |
Chain | AIA / 1G |
Non-redundant | False |
Interacting RNA chains | EB/1G |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPE |
Residue | . / 3436 |
Chain | EZA / 14 |
Non-redundant | True |
Interacting RNA chains | DC/14 |
Volume | 497.35 Å3 |
Hydrophobicity | 0.025 |
Hydrophilicity | 1.343 |
Buriedness | 0.672 |
Don/acc character | 1.862 |
SiteScore | 0.982 |
D Score | 0.905 |