Complex 5ib7
System information
Experimental technique | X-ray |
Experimental resolution | 2.99 |
System mass | 4540.51 kDa |
Deposition year | 2016 |
Molecule type | RNA/Protein |
# RNA entities | 5 |
Organism | Thermus |
RCSB PDB Entry | 5ib7 |
Reference | Rozov Alexey, Westhof Eric, Yusupov Marat, Yusupova Gulnara. . The ribosome prohibits the G•U wobble geometry at the first position of the codon–anticodon helix Nucleic Acids Research |
Compound | PAR |
Residue | . / 1702 |
Chain | ZHA / 1G |
Non-redundant | False |
Interacting RNA chains | EB/1G |
Volume | 300.81 Å3 |
Hydrophobicity | 0.092 |
Hydrophilicity | 1.063 |
Buriedness | 0.671 |
Don/acc character | 1.018 |
SiteScore | 0.929 |
D Score | 0.928 |
Compound | SPE |
Residue | . / 1703 |
Chain | AIA / 1G |
Non-redundant | False |
Interacting RNA chains | EB/1G |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPE |
Residue | . / 3436 |
Chain | EZA / 14 |
Non-redundant | True |
Interacting RNA chains | DC/14 |
Volume | 495.63 Å3 |
Hydrophobicity | 0.083 |
Hydrophilicity | 1.389 |
Buriedness | 0.687 |
Don/acc character | 1.064 |
SiteScore | 0.993 |
D Score | 0.900 |