Complex 5j5b
System information
Experimental technique | X-ray |
Experimental resolution | 2.80 |
System mass | 4271.83 kDa |
Deposition year | 2016 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Escherichia |
RCSB PDB Entry | 5j5b |
Reference | Cocozaki Alexis I., Altman Roger B., Huang Jian, Buurman Ed T., Kazmirski Steven L., Doig Peter, Prince D. Bryan, Blanchard Scott C., Cate Jamie H. D., Ferguson Andrew D.. . Resistance mutations generate divergent antibiotic susceptibility profiles against translation inhibitors Proceedings of the National Academy of Sciences |
Compound | 1PE |
Residue | . / 3202 |
Chain | GX / DA |
Non-redundant | False |
Interacting RNA chains | AD/DA |
Volume | 326.19 Å3 |
Hydrophobicity | 0.226 |
Hydrophilicity | 1.165 |
Buriedness | 0.705 |
Don/acc character | 2.514 |
SiteScore | 1.005 |
D Score | 0.983 |
Compound | PG4 |
Residue | . / 1601 |
Chain | GG / BA |
Non-redundant | False |
Interacting RNA chains | BA/BA |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PG4 |
Residue | . / 3215 |
Chain | TX / DA |
Non-redundant | False |
Interacting RNA chains | AD/DA |
Volume | 451.73 Å3 |
Hydrophobicity | 0.258 |
Hydrophilicity | 0.904 |
Buriedness | 0.664 |
Don/acc character | 1.231 |
SiteScore | 0.884 |
D Score | 0.890 |
Compound | TAC |
Residue | . / 1678 |
Chain | AG / AA |
Non-redundant | False |
Interacting RNA chains | A/AA |
Volume | 193.79 Å3 |
Hydrophobicity | 0.263 |
Hydrophilicity | 1.147 |
Buriedness | 0.700 |
Don/acc character | 1.830 |
SiteScore | 0.841 |
D Score | 0.780 |
Compound | TAC |
Residue | . / 1602 |
Chain | HG / BA |
Non-redundant | False |
Interacting RNA chains | BA/BA |
Volume | 179.73 Å3 |
Hydrophobicity | 0.324 |
Hydrophilicity | 1.199 |
Buriedness | 0.731 |
Don/acc character | 1.220 |
SiteScore | 0.843 |
D Score | 0.758 |