HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5ob3

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 22.91 kDa
Deposition year 2017
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5ob3
Reference Fernandez-Millan Pablo, Autour Alexis, Ennifar Eric, Westhof Eric, Ryckelynck Michael. . Crystal structure and fluorescence properties of the iSpinach aptamer in complex with DFHBI RNA

Compound 1TU
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
Volume 394.45 Å3
Hydrophobicity 0.450
Hydrophilicity 1.003
Buriedness 0.640
Don/acc character 2.159
SiteScore 0.968
D Score 0.997

Compound SPM
Residue . / 104
Chain E / A
Non-redundant True
Interacting RNA chains A/A
Volume 245.59 Å3
Hydrophobicity 0.040
Hydrophilicity 0.984
Buriedness 0.670
Don/acc character 3.206
SiteScore 0.711
D Score 0.661