HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5ob3

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 22.91 kDa
Deposition year 2017
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5ob3
Reference Fernandez-Millan Pablo, Autour Alexis, Ennifar Eric, Westhof Eric, Ryckelynck Michael. . Crystal structure and fluorescence properties of the iSpinach aptamer in complex with DFHBI RNA

Compound 1TU
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
Volume 395.48 Å3
Hydrophobicity 0.602
Hydrophilicity 0.857
Buriedness 0.650
Don/acc character 1.971
SiteScore 1.153
D Score 1.051

Compound SPM
Residue . / 104
Chain E / A
Non-redundant True
Interacting RNA chains A/A
Volume 249.36 Å3
Hydrophobicity 0.033
Hydrophilicity 0.987
Buriedness 0.683
Don/acc character 3.453
SiteScore 0.887
D Score 0.690