HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5ob3

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 22.91 kDa
Deposition year 2017
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5ob3
Reference Fernandez-Millan Pablo, Autour Alexis, Ennifar Eric, Westhof Eric, Ryckelynck Michael. . Crystal structure and fluorescence properties of the iSpinach aptamer in complex with DFHBI RNA

Compound 1TU
Residue . / 101
Chain B / A
Non-redundant True
Interacting RNA chains A/A
Volume 383.82 Å3
Hydrophobicity 0.459
Hydrophilicity 1.008
Buriedness 0.656
Don/acc character 0.687
SiteScore 0.978
D Score 1.005

Compound SPM
Residue . / 104
Chain E / A
Non-redundant True
Interacting RNA chains A/A
Volume 235.98 Å3
Hydrophobicity 0.008
Hydrophilicity 1.282
Buriedness 0.670
Don/acc character 1.771
SiteScore 0.802
D Score 0.694