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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1215 RNA-SM complexes found
Structure of complex 6dti

6dti

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an unmodifed anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin

SM: PAR

Structure of complex 6ft6

6ft6

Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors

SM: GTP

Structure of complex 6gaw

6gaw

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.

SM: 5GP 5GP SPM SPM SPM

Structure of complex 6gaz

6gaz

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 28S ribosomal subunit.

SM: SPM

Structure of complex 6gb2

6gb2

Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.

SM: 5GP 5GP SPM SPM

Structure of complex 6gq1

6gq1

Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP/sordarin)

SM: GCP

Structure of complex 6gqb

6gqb

Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)

SM: GDP

Structure of complex 6gqv

6gqv

Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)

SM: GCP

Structure of complex 6gxo

6gxo

Cryo-EM structure of a rotated E. coli 70S ribosome in complex with RF3-GDPCP, RF1(GAQ) and P/E-tRNA (State IV)

SM: GCP

Structure of complex 6ha1

6ha1

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

SM: TEL

Structure of complex 6ha8

6ha8

Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosome

SM: TEL

Structure of complex 6hd7

6hd7

Cryo-EM structure of the ribosome-NatA complex

SM: 3HE

Structure of complex 6hhq

6hhq

Crystal structure of compound C45 bound to the yeast 80S ribosome

SM: G5B G5B

Structure of complex 6hiv

6hiv

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete mitoribosome

SM: SPM UTP

Structure of complex 6hiw

6hiw

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the complete small mitoribosomal subunit in complex with mt-IF-3

SM: SPM UTP

Structure of complex 6hiy

6hiy

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the body of the small mitoribosomal subunit in complex with mt-IF-3

SM: SPM

Structure of complex 6hiz

6hiz

Cryo-EM structure of the Trypanosoma brucei mitochondrial ribosome - This entry contains the head of the small mitoribosomal subunit

SM: UTP

Structure of complex 6i0y

6i0y

TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel

SM: TRP

Structure of complex 6i7v

6i7v

Ribosomal protein paralogs bL31 and bL36

SM: 1PE 1PE PG4 PG4 PG4

Structure of complex 6i9r

6i9r

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

SM: H8T

Structure of complex 6k32

6k32

RdRp complex

SM: UTP

Structure of complex 6kwr

6kwr

Crystal structure of enterovirus 71 polymerase elongation complex (ddCTP form)

SM: DCT

Structure of complex 6las

6las

the wildtype SAM-VI riboswitch bound to SAM

SM: SAM SAM

Structure of complex 6lau

6lau

the wildtype SAM-VI riboswitch bound to SAH

SM: GTP SAH SAH

Structure of complex 6lax

6lax

the mutant SAM-VI riboswitch (U6C) bound to SAM

SM: SAM SAM

Structure of complex 6laz

6laz

the wildtype SAM-VI riboswitch bound to a N-mustard SAM analog M1

SM: E7X E7X

Structure of complex 6mkn

6mkn

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin

SM: PAR

Structure of complex 6mpf

6mpf

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a 2-thiocytidine (s2C32) and inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 1 (TRNAARG1) bound to an mRNA with an CGC-codon in the A-site and paromomycin

SM: PAR

Structure of complex 6mpi

6mpi

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a 2-thiocytidine (s2C32) and inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 1 (TRNAARG1) bound to an mRNA with an CGU-codon in the A-site and paromomycin

SM: PAR

Structure of complex 6nbj

6nbj

Qri7

SM: ATP

Structure of complex 6nd5

6nd5

Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution

SM: CLM CLM

Structure of complex 6nd6

6nd6

Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution

SM: ERY ERY

Structure of complex 6o97

6o97

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

SM: LUJ LUJ LUJ LUJ LUJ LUJ

Structure of complex 6of1

6of1

Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution

SM: DI0 DI0

Structure of complex 6of6

6of6

Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-site

SM: AMP PAR PAR

Structure of complex 6ofx

6ofx

Non-rotated ribosome (Structure I)

SM: FME

Structure of complex 6ogz

6ogz

In situ structure of Rotavirus RNA-dependent RNA polymerase at transcript-elongated state

SM: UTP

Structure of complex 6oj2

6oj2

Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-site

SM: PAR PAR

Structure of complex 6okk

6okk

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, small subunit

SM: 34G

Structure of complex 6ole

6ole

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs

SM: MVM

Structure of complex 6olf

6olf

Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAs

SM: MVM

Structure of complex 6olg

6olg

Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)

SM: MVM

Structure of complex 6oli

6oli

Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)

SM: MVM

Structure of complex 6olz

6olz

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA

SM: MVM

Structure of complex 6om0

6om0

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAs

SM: MVM

Structure of complex 6om6

6om6

Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA

SM: KKL

Structure of complex 6om7

6om7

Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs

SM: MVM

Structure of complex 6ope

6ope

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A site

SM: PAR PAR

Structure of complex 6ord

6ord

Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site

SM: PAR PAR

Structure of complex 6pc5

6pc5

E. coli 50S ribosome bound to compounds 46 and VS1

SM: O7V

Structure of complex 6pc6

6pc6

E. coli 50S ribosome bound to compound 47

SM: O7S

Structure of complex 6pc7

6pc7

E. coli 50S ribosome bound to compound 46

SM: O7V

Structure of complex 6pc8

6pc8

E. coli 50S ribosome bound to compound 40q

SM: O7Y

Structure of complex 6pch

6pch

E. coli 50S ribosome bound to compound 21

SM: O8D

Structure of complex 6pcq

6pcq

E. coli 50S ribosome bound to VM2

SM: O8J

Structure of complex 6pcr

6pcr

E. coli 50S ribosome bound to compound 40o

SM: O8P

Structure of complex 6pcs

6pcs

E. coli 50S ribosome bound to compound 40e

SM: O8S

Structure of complex 6pct

6pct

E. coli 50S ribosome bound to compound 41q

SM: O8V

Structure of complex 6qcv

6qcv

Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer and CTP

SM: CTP

Structure of complex 6qul

6qul

Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolid

SM: AMP JJH