HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6dti

System information

Experimental technique X-ray
Experimental resolution 3.54
System mass 788.87 kDa
Deposition year 2018
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 6dti
Reference Vangaveti Sweta, Cantara William A., Spears Jessica L., DeMirci Hasan, Murphy Frank V., Ranganathan Sri V., Sarachan Kathryn L., Agris Paul F.. . A Structural Basis for Restricted Codon Recognition Mediated by 2-thiocytidine in tRNA Containing a Wobble Position Inosine Journal of Molecular Biology
Equivalence Class NR_all_65795.87
BGSU version: 4.49

Compound PAR
Residue . / 1601
Chain X / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 55.91 Å3
Hydrophobicity 0.072
Hydrophilicity 0.900
Buriedness 0.563
Don/acc character 3.423
SiteScore 0.787
D Score 0.600
Kd