HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6of6

System information

Experimental technique X-ray
Experimental resolution 3.20
System mass 4529.24 kDa
Deposition year 2019
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 6of6
Reference Nguyen Ha An, Sunita S., Dunham Christine M.. . Disruption of evolutionarily correlated tRNA elements impairs accurate decoding Proceedings of the National Academy of Sciences

Compound AMP
Residue . / 101
Chain TI / QY
Non-redundant True
Interacting RNA chains JA/RA, Y/QY
Volume 256.56 Å3
Hydrophobicity 0.469
Hydrophilicity 1.043
Buriedness 0.686
Don/acc character 0.738
SiteScore 1.142
D Score 1.011

Compound PAR
Residue . / 1711
Chain OH / QA
Non-redundant True
Interacting RNA chains A/QA
Volume 302.18 Å3
Hydrophobicity 0.150
Hydrophilicity 1.061
Buriedness 0.690
Don/acc character 2.694
SiteScore 1.042
D Score 0.877

Compound PAR
Residue . / 1717
Chain YCA / XA
Non-redundant True
Interacting RNA chains EB/XA
Volume 314.53 Å3
Hydrophobicity 0.148
Hydrophilicity 1.068
Buriedness 0.684
Don/acc character 2.703
SiteScore 1.080
D Score 0.924