HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6gqv

System information

Experimental technique Electron Microscopy
Experimental resolution 4.00
System mass 3191.43 kDa
Deposition year 2018
Molecule type RNA/Protein
# RNA entities 1
Organism Saccharomyces
RCSB PDB Entry 6gqv
Reference Pellegrino Simone, Demeshkina Natalia, Mancera-Martinez Eder, Melnikov Sergey, Simonetti Angelita, Myasnikov Alexander, Yusupov Marat, Yusupova Gulnara, Hashem Yaser. . Structural Insights into the Role of Diphthamide on Elongation Factor 2 in mRNA Reading-Frame Maintenance Journal of Molecular Biology
Equivalence Class NR_all_90506.85
BGSU version: 4.49

Compound GCP
Residue . / 901
Chain OC / AX
Non-redundant True
Interacting RNA chains A/1
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains A/1: rRNA
RNA family global rRNA
Volume 575.90 Å3
Hydrophobicity 0.100
Hydrophilicity 1.542
Buriedness 0.791
Don/acc character 0.823
SiteScore 1.062
D Score 0.912
Kd