HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6i7v

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 4257.12 kDa
Deposition year 2018
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 6i7v
Reference Lilleorg Silva, Reier Kaspar, Pulk Arto, Liiv Aivar, Tammsalu Triin, Peil Lauri, Cate Jamie H.D., Remme Jaanus. . Bacterial ribosome heterogeneity: Changes in ribosomal protein composition during transition into stationary growth phase Biochimie

Compound 1PE
Residue . / 3034
Chain NI / DA
Non-redundant True
Interacting RNA chains C/DA
Volume 108.39 Å3
Hydrophobicity 0.098
Hydrophilicity 1.414
Buriedness 0.638
Don/acc character 1.137
SiteScore 0.707
D Score 0.538

Compound 1PE
Residue . / 3065
Chain SJ / DA
Non-redundant True
Interacting RNA chains C/DA
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound PG4
Residue . / 1607
Chain OF / BA
Non-redundant False
Interacting RNA chains B/BA
Volume 37.73 Å3
Hydrophobicity 0.056
Hydrophilicity 1.194
Buriedness 0.585
Don/acc character 1.603
SiteScore 0.535
D Score 0.211

Compound PG4
Residue . / 3048
Chain BJ / DA
Non-redundant True
Interacting RNA chains C/DA
Volume 283.66 Å3
Hydrophobicity 0.254
Hydrophilicity 0.914
Buriedness 0.626
Don/acc character 1.491
SiteScore 1.127
D Score 1.018

Compound PG4
Residue . / 202
Chain NW / DS
Non-redundant True
Interacting RNA chains C/DA
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -