HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6ddg

System information

Experimental technique Electron Microscopy
Experimental resolution 3.10
System mass 1306.30 kDa
Deposition year 2018
Molecule type RNA/Protein
# RNA entities 1
Organism Staphylococcus
RCSB PDB Entry 6ddg
Reference Belousoff Matthew J., Venugopal Hari, Wright Alexander, Seoner Samuel, Stuart Isabella, Stubenrauch Chris, Bamert Rebecca S., Lupton David W., Lithgow Trevor. . cryoEM‐Guided Development of Antibiotics for Drug‐Resistant Bacteria ChemMedChem
Equivalence Class NR_all_90633.29
BGSU version: 4.48

Compound G6M
Residue . / 3001
Chain BA / 1
Non-redundant True
Interacting RNA chains Z/1
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains Z/1: rRNA
RNA family global rRNA
Volume 555.32 Å3
Hydrophobicity 0.192
Hydrophilicity 1.250
Buriedness 0.778
Don/acc character 1.882
SiteScore 1.203
D Score 0.999
Kd