HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6lau

System information

Experimental technique X-ray
Experimental resolution 3.11
System mass 69.85 kDa
Deposition year 2019
Molecule type RNA/Protein
# RNA entities 1
Organism Bifidobacterium
RCSB PDB Entry 6lau
Reference Sun Aiai, Gasser Catherina, Li Fudong, Chen Hao, Mair Stefan, Krasheninina Olga, Micura Ronald, Ren Aiming. . SAM-VI riboswitch structure and signature for ligand discrimination Nature Communications

Compound GTP
Residue . / 103
Chain H / A
Non-redundant True
Interacting RNA chains A/A
Volume 132.40 Å3
Hydrophobicity 0.126
Hydrophilicity 0.666
Buriedness 0.543
Don/acc character 2.307
SiteScore 0.866
D Score 0.725

Compound SAH
Residue . / 101
Chain F / A
Non-redundant True
Interacting RNA chains A/A
Volume 105.64 Å3
Hydrophobicity 0.431
Hydrophilicity 0.884
Buriedness 0.639
Don/acc character 2.703
SiteScore 0.816
D Score 0.618

Compound SAH
Residue . / 101
Chain I / B
Non-redundant False
Interacting RNA chains B/B
Volume 100.16 Å3
Hydrophobicity 0.734
Hydrophilicity 0.665
Buriedness 0.629
Don/acc character 2.628
SiteScore 0.913
D Score 0.763