HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6gb2

System information

Experimental technique Electron Microscopy
Experimental resolution 3.20
System mass 1993.75 kDa
Deposition year 2018
Molecule type RNA/Protein
# RNA entities 1
Organism Sus
RCSB PDB Entry 6gb2
Reference Kummer Eva, Leibundgut Marc, Rackham Oliver, Lee Richard G., Boehringer Daniel, Filipovska Aleksandra, Ban Nenad. . Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM Nature

Compound 5GP
Residue . / 3203
Chain HJ / BA
Non-redundant True
Interacting RNA chains Q/BA
Volume 325.51 Å3
Hydrophobicity 0.221
Hydrophilicity 0.973
Buriedness 0.640
Don/acc character 1.888
SiteScore 1.026
D Score 0.881

Compound 5GP
Residue . / 3204
Chain IJ / BA
Non-redundant True
Interacting RNA chains Q/BA
Volume 231.87 Å3
Hydrophobicity 0.242
Hydrophilicity 1.460
Buriedness 0.577
Don/acc character 0.640
SiteScore 1.069
D Score 0.811

Compound SPM
Residue . / 3205
Chain JJ / BA
Non-redundant True
Interacting RNA chains Q/BA
Volume 665.08 Å3
Hydrophobicity 0.160
Hydrophilicity 1.349
Buriedness 0.792
Don/acc character 1.738
SiteScore 1.063
D Score 0.976

Compound SPM
Residue . / 201
Chain WJ / BR
Non-redundant True
Interacting RNA chains Q/BA
Volume 600.25 Å3
Hydrophobicity 0.237
Hydrophilicity 1.098
Buriedness 0.740
Don/acc character 1.371
SiteScore 1.028
D Score 1.026