HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6las

System information

Experimental technique X-ray
Experimental resolution 2.71
System mass 69.22 kDa
Deposition year 2019
Molecule type RNA/Protein
# RNA entities 1
Organism Bifidobacterium
RCSB PDB Entry 6las
Reference Sun Aiai, Gasser Catherina, Li Fudong, Chen Hao, Mair Stefan, Krasheninina Olga, Micura Ronald, Ren Aiming. . SAM-VI riboswitch structure and signature for ligand discrimination Nature Communications

Compound SAM
Residue . / 101
Chain F / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: riboswitch
RNA family global riboswitch
Volume 119.36 Å3
Hydrophobicity 0.336
Hydrophilicity 0.860
Buriedness 0.641
Don/acc character 2.409
SiteScore 0.889
D Score 0.713
Kd

Compound SAM
Residue . / 101
Chain G / B
Non-redundant False
Interacting RNA chains B/B
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains B/B: riboswitch
RNA family global riboswitch
Volume 90.90 Å3
Hydrophobicity 1.040
Hydrophilicity 0.676
Buriedness 0.696
Don/acc character 1.944
SiteScore 0.894
D Score 0.720
Kd