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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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2077 RNA-SM complexes found
Structure of complex 8hzm

8hzm

A new fluorescent RNA aptamer bound with N, manganese soak

SM: NI4 NI4

Structure of complex 8i3z

8i3z

Crystal structure of NAD-II riboswitch (two strands) with NMN at 1.67 angstrom

SM: NMN NMN

Structure of complex 8i43

8i43

Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

Structure of complex 8i44

8i44

Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

Structure of complex 8i45

8i45

Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

Structure of complex 8i46

8i46

Interaction between a fluoroquinolone derivative KG022 and RNAs: effect of base pairs 3' adjacent to the bulge out residues

SM: 53D

Structure of complex 8i7n

8i7n

The Tet-S1 state of G264A mutated Tetrahymena group I intron with 6nt 3'/5'-exon and 2-aminopurine nucleoside

SM: OJI

Structure of complex 8ifb

8ifb

Dibekacin-bound E.coli 70S ribosome in the PURE system

SM: 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D SPM

Structure of complex 8ifc

8ifc

Arbekacin-bound E.coli 70S ribosome in the PURE system

SM: 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G SPM

Structure of complex 8ifd

8ifd

Dibekacin-added human 80S ribosome

SM: 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D 84D

Structure of complex 8ife

8ife

Arbekacin-added human 80S ribosome

SM: 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G 84G

Structure of complex 8jy0

8jy0

Crystal structure of RhoBAST complexed with TMR-DN

SM: V8C V8C V8C

Structure of complex 8k2a

8k2a

Cryo-EM structure of the human 55S mitoribosome with Tigecycline

SM: T1C T1C T1C T1C

Structure of complex 8k2b

8k2b

Cryo-EM structure of the human 39S mitoribosome with Tigecycline

SM: T1C

Structure of complex 8k2c

8k2c

Cryo-EM structure of the human 80S ribosome with Tigecycline

SM: T1C T1C T1C T1C T1C T1C T1C T1C T1C

Structure of complex 8k2d

8k2d

Cryo-EM structure of the yeast 80S ribosome with tigecycline, eEF2, Stm1 and eIF5A

SM: GDP T1C T1C T1C T1C T1C T1C

Structure of complex 8k7w

8k7w

Crystal structure of Broccoli aptamer with DFHBI-1T

SM: 2ZY

Structure of complex 8k82

8k82

Cryo-EM structure of the yeast 80S ribosome with tigecycline, Not5 and P-site tRNA

SM: T1C T1C T1C T1C T1C T1C

Structure of complex 8k85

8k85

Crystal structure of Red Broccoli aptamer with OBI

SM: A1EBI A1EBI

Structure of complex 8keb

8keb

Crystal structure of 2'-dG-III riboswitch with 2'-dG

SM: GNG

Structure of complex 8khh

8khh

Crystal structure of 2'-dG-III riboswitch with guanosine

SM: GMP GMP

Structure of complex 8oeq

8oeq

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (250uM)

SM: 3K5 3K5 PAR PAR PAR PAR PAR PAR PAR PAR

Structure of complex 8ogj

8ogj

Structure of Candida albicans 80S ribosome in complex with mefloquine

SM: SPK YMZ YMZ

Structure of complex 8oh6

8oh6

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (500umol)

SM: 3K5 3K5 PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

Structure of complex 8oi5

8oi5

Crystal structure of the Candida albicans 80S ribosome in complex with Paromomycin (2mM)

SM: 3K5 PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

Structure of complex 8p2g

8p2g

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state

SM: WUX

Structure of complex 8p2h

8p2h

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state

SM: FUA

Structure of complex 8p2k

8p2k

Ternary complex of translating ribosome, NAC and METAP1

SM: SPM SPM SPM

Structure of complex 8p4f

8p4f

Structural insights into human co-transcriptional capping - structure 6

SM: SAM

Structure of complex 8oin

8oin

55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA

SM: SPM

Structure of complex 8oip

8oip

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

SM: SPM

Structure of complex 8oiv

8oiv

Monkeypox virus VP39 in complex with SAH and cap0

SM: SAH

Structure of complex 8oj3

8oj3

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418 (rotated state)

SM: 3K5 3K5 GET GET

Structure of complex 8ols

8ols

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and intronistat B

SM: EPE EPE SPM SPM VTE

Structure of complex 8olv

8olv

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and ARN25850

SM: EPE EPE SPM VTR

Structure of complex 8oly

8oly

Structure of Oceanobacillus iheyensis group II intron post first step of splicing in the presence of K+, Mg2+ and intronistat B

SM: EPE EPE EPE SPM SPM

Structure of complex 8olz

8olz

Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 2h30 soaking

SM: EPE SPM VTE

Structure of complex 8om0

8om0

Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+ and intronistat B

SM: GDE

Structure of complex 8opp

8opp

Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS

SM: P5E

Structure of complex 8p16

8p16

E167K RF2 on E. coli 70S release complex with UGG (Structure I)

SM: SPM

Structure of complex 8p17

8p17

E167K RF2 on E. coli 70S release complex with UGG (Structure II)

SM: SPM

Structure of complex 8p18

8p18

E167K RF2 on E. coli 70S release complex with UGG (Structure III)

SM: SPM

Structure of complex 8p2f

8p2f

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state

SM: WUX

Structure of complex 8p8b

8p8b

Mycoplasma pneumoniae large ribosomal subunit in chloramphenicol-treated cells

SM: CLM SPM SPM SPM SPM

Structure of complex 8p8m

8p8m

Yeast 60S ribosomal subunit, RPL39 deletion

SM: SPM

Structure of complex 8p8n

8p8n

Mouse RPL39 integrated into the yeast 60S ribosomal subunit

SM: SPM

Structure of complex 8p8u

8p8u

Yeast 60S ribosomal subunit

SM: SPM

Structure of complex 8p8v

8p8v

Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (leading 70S)

SM: CLM

Structure of complex 8p8w

8p8w

Mycoplasma pneumoniae di-ribosome in chloramphenicol-treated cells (following 70S)

SM: CLM

Structure of complex 8p9a

8p9a

80S yeast ribosome in complex with Methyllissoclimide

SM: XBI XBI

Structure of complex 8peg

8peg

Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)

SM: ATP ATP

Structure of complex 9c3h

9c3h

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

SM: B3P

Structure of complex 8pfr

8pfr

Mouse RPL39L integrated into the yeast 60S ribosomal subunit

SM: SPM

Structure of complex 8pnn

8pnn

80S yeast ribosome in complex with Bromolissoclimide

SM: ZWB ZWB

Structure of complex 8pnq

8pnq

Influenza A/H7N9 polymerase in elongation state with continuous Pol II pS5 CTD peptide mimic bound in site 1A/2A

SM: 2KH

Structure of complex 8psx

8psx

Tilapia Lake Virus polymerase in vRNA elongation state (transcriptase conformation)

SM: A0I

Structure of complex 8psz

8psz

Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)

SM: A0I

Structure of complex 8pv1

8pv1

Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structure

SM: GTP

Structure of complex 8pv2

8pv2

Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1

SM: GTP

Structure of complex 8qrn

8qrn

mt-SSU in GTPBP8 knock-out cells, state 4

SM: NAD SPM SRY