HARIBOSS - RNA-SM complexes list

8u9x

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STRUCTURAL BASIS OF TRANSCRIPTION: RNA POLYMERASE II SUBSTRATE BINDING AND METAL COORDINATION AT 3.0 A OF T834P MUTANT USING A FREE-ELECTRON LASER

SM: ATP

8pv3

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Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structure

SM: GTP

8pv4

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Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure

SM: GTP

8pv5

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Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure

SM: GTP

8pv7

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Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structure

SM: GTP

8rul

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+ and Mg2+

SM: EPE EPE

8vpv

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Class III PreQ1 riboswitch mutant delta84

SM: PRF

8pvk

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Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure

SM: GTP

8pvl

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Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure

SM: GTP

8q5i

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Structure of Candida albicans 80S ribosome in complex with cephaeline

SM: K16 K16 K16 SPK

8qk7

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E167K RF2 on E. coli 70S release complex with UAA

SM: SPM SPM

8qmh

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Crystal structure of RNA G2C4 repeats in complex with small synthetic molecule ANP77

SM: W53

8qrk

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1

SM: NAD SPM SRY

8qrl

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 2

SM: NAD

8qrm

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mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 3

SM: NAD SPM SRY

8qyx

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Human 60S ribosomal subunit

SM: ATP SPM SPM SPM SPM SPM

8qz8

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Tilapia Lake Virus polymerase in vRNA pre-termination state (transcriptase conformation)

SM: G2P

8r62

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Solution structure of Risdiplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y59

8r63

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Solution structure of branaplam bound to the RNA duplex formed upon 5'-splice site recognition

SM: Y53

8r6y

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Structure of the SFTSV L protein stalled in a transcription-specific early elongation state with bound capped RNA [TRANSCRIPTION-EARLY-ELONGATION]

SM: 2KH

8r8p

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Solution structure of SMN-CX bound to the RNA helix formed upon SMN2 exon7 5'-splice site recognition

SM: YB3

8rri

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Human mitochondrial ribosome in complex with antibiotic tigecycline

SM: T1C T1C T1C

8ruh

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon

SM: EPE

8rui

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and intronistat B after 1h soaking

SM: VTE

8ruj

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Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+, 5'-exon, and ARN25850 after 1h soaking

SM: VTR

8ruk

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Structure of Oceanobacillus iheyensis group II intron in the presence of Na+, Mg2+, and ARN25850

SM: VTR

8vvu

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Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

SM: ANM

8rum

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and intronistat B

SM: VTE

8run

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Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+, and ARN25850

SM: EPE EPE VTR

8rxh

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CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

SM: A1H4F

8s1p

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YlmH bound to PtRNA-50S

SM: CLM

8s8w

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SARS-CoV-2 nsp10-16 methyltransferase in complex with Sangivamycin and m7GpppA-RNA (Cap0-RNA)

SM: SAM SGV

8s8x

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SARS-CoV-2 nsp10-16 methyltransferase in complex with Toyocamycin and m7GpppA-RNA (Cap0-RNA)

SM: TO1

8scb

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Terminating ribosome with SRI-41315

SM: ZVM

8sq9

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SARS-CoV-2 replication-transcription complex bound to nsp9 and UMPCPP, as a pre-catalytic NMPylation intermediate

SM: WSB

8sqj

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SARS-CoV-2 replication-transcription complex bound to RNA-nsp9, as a noncatalytic RNA-nsp9 binding mode

SM: VSN

8sqk

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SARS-CoV-2 replication-transcription complex bound to RNA-nsp9 and GDP-betaS, as a pre-catalytic deRNAylation/mRNA capping intermediate

SM: VSN VSN

8swg

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RNA duplex bound with GpppA dinucleotide ligand

SM: G3A G3A

8swo

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GpppA dinucleotide ligand binding to RNA UC template

SM: G3A G3A

8sx5

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GpppA dinucleotide binding to RNA CU template

SM: G3A G3A

8sx6

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RNA duplex bound with GMP and AMP monomers

SM: 5GP 5GP AMP

8sxl

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RNA UU template binding to AMP monomer

SM: AMP AMP AMP

8sxt

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Structure of LINE-1 ORF2p with template:primer hybrid

SM: TTP

8sy1

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RNA duplex bound with imidazolium bridged GA dinucleotide

SM: WZW WZW WZW WZW

8sy5

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dS-BTP base pair in the active site

SM: X0F

8sy6

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-UTP base pair in the active site

SM: DGP UTP

8sy7

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E. coli DNA-directed RNA polymerase transcription elongation complex bound the unnatural dB-STP base pair in the active site

SM: X0O

8syk

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Crystal structure of RNA device 43 truncation mutant 3 (U100C), holo state

SM: TAC TAC TAC TAC

8syl

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Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

SM: AKN AKN

8t2x

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, A-site tRNA, messenger RNA and eIF5A, PRE

SM: 3HE

8t2y

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, PRE

SM: 3HE

8t2z

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Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

SM: 3HE

8t30

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Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated

SM: 3HE

8t3a

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, sordarin, and hibernating factor Los2

SM: GDP

8t3c

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

SM: GDP

8t3e

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Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure IV

SM: GDP

8t5o

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Cryo-EM structure of RNA device 43, holo state

SM: TAC

8t8b

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MAI-tripeptidyl-tRNA analog ACCA-IAMf at 2.65A resolution

SM: ARG ARG

8t8c

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Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site formyl-MFI-tripeptidyl-tRNA analog ACCA-IFMf at 2.60A resolution

SM: ARG ARG

8tg4

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tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-2"-phosphate and 2'-OH RNA

SM: 9SO