Complex 8oh6
System information
Experimental technique | X-ray |
Experimental resolution | 3.35 |
System mass | 6329.54 kDa |
Deposition year | 2023 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Candida |
RCSB PDB Entry | 8oh6 |
Reference | Kolosova Olga, Zgadzay Yury, Stetsenko Artem, Sukhinina Anastasia P., Atamas Anastasia, Validov Shamil, Rogachev Andrey, Usachev Konstantin, Jenner Lasse, Dmitriev Sergey E., Yusupova Gulnara, Guskov Albert, Yusupov Marat. . Mechanism of read-through enhancement by aminoglycosides and mefloquine Proceedings of the National Academy of Sciences |
Compound | PAR |
Residue | . / 3457 |
Chain | IH / 1 |
Non-redundant | True |
Interacting RNA chains | A/1 |
Volume | 921.30 Å3 |
Hydrophobicity | 0.175 |
Hydrophilicity | 1.141 |
Buriedness | 0.722 |
Don/acc character | 1.923 |
SiteScore | 1.016 |
D Score | 1.001 |
Compound | PAR |
Residue | . / 3459 |
Chain | KH / 1 |
Non-redundant | False |
Interacting RNA chains | A/1 |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PAR |
Residue | . / 3461 |
Chain | MH / 1 |
Non-redundant | True |
Interacting RNA chains | A/1 |
Volume | 244.56 Å3 |
Hydrophobicity | 0.013 |
Hydrophilicity | 0.945 |
Buriedness | 0.643 |
Don/acc character | 3.754 |
SiteScore | 0.706 |
D Score | 0.664 |
Compound | PAR |
Residue | . / 3462 |
Chain | NH / 1 |
Non-redundant | True |
Interacting RNA chains | A/1 |
Volume | 270.28 Å3 |
Hydrophobicity | 0.089 |
Hydrophilicity | 0.851 |
Buriedness | 0.735 |
Don/acc character | 2.334 |
SiteScore | 0.582 |
D Score | 0.489 |
Compound | PAR |
Residue | . / 3403 |
Chain | XKA / AS |
Non-redundant | False |
Interacting RNA chains | BC/AS |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | PAR |
Residue | . / 3404 |
Chain | YKA / AS |
Non-redundant | False |
Interacting RNA chains | BC/AS |
Volume | 253.48 Å3 |
Hydrophobicity | 0.026 |
Hydrophilicity | 0.983 |
Buriedness | 0.631 |
Don/acc character | 3.057 |
SiteScore | 0.730 |
D Score | 0.696 |
Compound | PAR |
Residue | . / 1802 |
Chain | ZGB / CM |
Non-redundant | False |
Interacting RNA chains | TD/CM |
Volume | 1101.03 Å3 |
Hydrophobicity | 0.072 |
Hydrophilicity | 1.205 |
Buriedness | 0.721 |
Don/acc character | 2.478 |
SiteScore | 1.015 |
D Score | 0.979 |