Complex 8ife
System information
Experimental technique | Electron Microscopy |
Experimental resolution | 2.57 |
System mass | 3828.11 kDa |
Deposition year | 2023 |
Molecule type | RNA/Protein |
# RNA entities | 3 |
Organism | Homo |
RCSB PDB Entry | 8ife |
Reference | Tomono Junta, Asano Kosuke, Chiashi Takuma, Suzuki Masato, Igarashi Masayuki, Takahashi Yoshiaki, Tanaka Yoshikazu, Yokoyama Takeshi. . Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside The Journal of Biochemistry |
Compound | 84G |
Residue | . / 5101 |
Chain | CC / 1A |
Non-redundant | True |
Interacting RNA chains | A/1A |
Volume | 727.50 Å3 |
Hydrophobicity | 0.146 |
Hydrophilicity | 1.274 |
Buriedness | 0.704 |
Don/acc character | 1.615 |
SiteScore | 1.004 |
D Score | 0.947 |
Compound | 84G |
Residue | . / 5102 |
Chain | DC / 1A |
Non-redundant | True |
Interacting RNA chains | A/1A |
Volume | 535.08 Å3 |
Hydrophobicity | 0.044 |
Hydrophilicity | 1.207 |
Buriedness | 0.675 |
Don/acc character | 1.350 |
SiteScore | 0.928 |
D Score | 0.879 |
Compound | 84G |
Residue | . / 5110 |
Chain | LC / 1A |
Non-redundant | True |
Interacting RNA chains | A/1A |
Volume | 777.58 Å3 |
Hydrophobicity | 0.082 |
Hydrophilicity | 1.267 |
Buriedness | 0.700 |
Don/acc character | 1.896 |
SiteScore | 1.001 |
D Score | 0.947 |
Compound | 84G |
Residue | . / 5116 |
Chain | RC / 1A |
Non-redundant | True |
Interacting RNA chains | A/1A |
Volume | 1558.59 Å3 |
Hydrophobicity | 0.083 |
Hydrophilicity | 1.253 |
Buriedness | 0.753 |
Don/acc character | 3.314 |
SiteScore | 1.037 |
D Score | 0.983 |
Compound | 84G |
Residue | . / 5117 |
Chain | SC / 1A |
Non-redundant | True |
Interacting RNA chains | A/1A |
Volume | 200.65 Å3 |
Hydrophobicity | 0.000 |
Hydrophilicity | 1.518 |
Buriedness | 0.681 |
Don/acc character | 1.626 |
SiteScore | 0.768 |
D Score | 0.572 |