Complex 8pnn
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 6564.04 kDa |
| Deposition year | 2023 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Saccharomyces |
| RCSB PDB Entry | 8pnn |
| Reference | Terrosu Salvatore, Nurullina Liliia, Supantanapong Nantamon, Pak Bonnie S., Nguyen Sierra, Holm Mikael, Wu Cheng, Lin Min, Horne David, Sachs Matthew S., Blanchard Scott C., Yusupov Marat, Vanderwal Christopher D.. . Synthesis of Differentially Halogenated Lissoclimide Analogues To Probe Ribosome E-Site Binding ACS Chemical Biology |
| Equivalence Class |
NR_all_90506.85
BGSU version: 4.48 |
| Compound | ZWB |
| Residue | . / 3826 |
| Chain | GMA / AR |
| Non-redundant | True |
| Interacting RNA chains | ZC/AR |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | ZC/AR: rRNA |
| RNA family global | rRNA |
| Volume | 366.32 Å3 |
| Hydrophobicity | 0.567 |
| Hydrophilicity | 1.008 |
| Buriedness | 0.702 |
| Don/acc character | 0.887 |
| SiteScore | 1.009 |
| D Score | 1.032 |
| Kd | — |
| Compound | ZWB |
| Residue | . / 3578 |
| Chain | ZXB / 1 |
| Non-redundant | True |
| Interacting RNA chains | ZE/1 |
| RNA environment detailled | protein, ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | ZE/1: rRNA |
| RNA family global | rRNA |
| Volume | 336.14 Å3 |
| Hydrophobicity | 0.507 |
| Hydrophilicity | 0.886 |
| Buriedness | 0.687 |
| Don/acc character | 1.012 |
| SiteScore | 1.022 |
| D Score | 1.063 |
| Kd | — |