Complex 8olv
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.81 |
| System mass | 130.45 kDa |
| Deposition year | 2023 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Oceanobacillus |
| RCSB PDB Entry | 8olv |
| Reference | Silvestri Ilaria, Manigrasso Jacopo, Andreani Alessandro, Brindani Nicoletta, Mas Caroline, Reiser Jean-Baptiste, Vidossich Pietro, Martino Gianfranco, McCarthy Andrew A., De Vivo Marco, Marcia Marco. . Targeting the conserved active site of splicing machines with specific and selective small molecule modulators Nature Communications |
| Compound | EPE |
| Residue | . / 441 |
| Chain | PA / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| Volume | 69.29 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.043 |
| Buriedness | 0.585 |
| Don/acc character | 7.971 |
| SiteScore | 0.295 |
| D Score | 0.144 |
| Compound | SPM |
| Residue | . / 440 |
| Chain | OA / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 252.79 Å3 |
| Hydrophobicity | 0.148 |
| Hydrophilicity | 0.917 |
| Buriedness | 0.649 |
| Don/acc character | 1.199 |
| SiteScore | 0.704 |
| D Score | 0.662 |
| Compound | VTR |
| Residue | . / 443 |
| Chain | RA / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| Volume | 395.14 Å3 |
| Hydrophobicity | 0.099 |
| Hydrophilicity | 1.431 |
| Buriedness | 0.718 |
| Don/acc character | 2.602 |
| SiteScore | 1.013 |
| D Score | 0.904 |