Complex 8oi5
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 6240.86 kDa |
| Deposition year | 2023 |
| Molecule type | RNA/Protein |
| # RNA entities | 3 |
| Organism | Candida |
| RCSB PDB Entry | 8oi5 |
| Reference | Kolosova Olga, Zgadzay Yury, Stetsenko Artem, Sukhinina Anastasia P., Atamas Anastasia, Validov Shamil, Rogachev Andrey, Usachev Konstantin, Jenner Lasse, Dmitriev Sergey E., Yusupova Gulnara, Guskov Albert, Yusupov Marat. . Mechanism of read-through enhancement by aminoglycosides and mefloquine Proceedings of the National Academy of Sciences |
| Compound | PAR |
| Residue | . / 3403 |
| Chain | CF / 1 |
| Non-redundant | True |
| Interacting RNA chains | A/1 |
| Volume | 818.05 Å3 |
| Hydrophobicity | 0.121 |
| Hydrophilicity | 1.224 |
| Buriedness | 0.717 |
| Don/acc character | 1.649 |
| SiteScore | 1.013 |
| D Score | 0.971 |
| Compound | PAR |
| Residue | . / 3420 |
| Chain | TF / 1 |
| Non-redundant | True |
| Interacting RNA chains | A/1 |
| Volume | 247.99 Å3 |
| Hydrophobicity | 0.009 |
| Hydrophilicity | 0.951 |
| Buriedness | 0.639 |
| Don/acc character | 3.394 |
| SiteScore | 0.678 |
| D Score | 0.629 |
| Compound | PAR |
| Residue | . / 3426 |
| Chain | ZF / 1 |
| Non-redundant | True |
| Interacting RNA chains | A/1 |
| Volume | 329.28 Å3 |
| Hydrophobicity | 0.037 |
| Hydrophilicity | 1.156 |
| Buriedness | 0.661 |
| Don/acc character | 2.668 |
| SiteScore | 0.938 |
| D Score | 0.912 |
| Compound | PAR |
| Residue | . / 3401 |
| Chain | PAA / AS |
| Non-redundant | True |
| Interacting RNA chains | AC/AS |
| Volume | 383.13 Å3 |
| Hydrophobicity | 0.142 |
| Hydrophilicity | 1.035 |
| Buriedness | 0.693 |
| Don/acc character | 2.155 |
| SiteScore | 0.808 |
| D Score | 0.775 |
| Compound | PAR |
| Residue | . / 3406 |
| Chain | UAA / AS |
| Non-redundant | True |
| Interacting RNA chains | AC/AS |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | PAR |
| Residue | . / 3408 |
| Chain | WAA / AS |
| Non-redundant | True |
| Interacting RNA chains | AC/AS |
| Volume | 241.13 Å3 |
| Hydrophobicity | 0.017 |
| Hydrophilicity | 0.903 |
| Buriedness | 0.622 |
| Don/acc character | 4.718 |
| SiteScore | 0.729 |
| D Score | 0.702 |
| Compound | PAR |
| Residue | . / 3410 |
| Chain | YAA / AS |
| Non-redundant | True |
| Interacting RNA chains | AC/AS |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | PAR |
| Residue | . / 1801 |
| Chain | LOA / CM |
| Non-redundant | True |
| Interacting RNA chains | SD/CM |
| Volume | 363.58 Å3 |
| Hydrophobicity | 0.169 |
| Hydrophilicity | 1.224 |
| Buriedness | 0.716 |
| Don/acc character | 1.222 |
| SiteScore | 0.986 |
| D Score | 0.937 |