Complex 8om0
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.61 |
| System mass | 128.52 kDa |
| Deposition year | 2023 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | Oceanobacillus |
| RCSB PDB Entry | 8om0 |
| Reference | Silvestri Ilaria, Manigrasso Jacopo, Andreani Alessandro, Brindani Nicoletta, Mas Caroline, Reiser Jean-Baptiste, Vidossich Pietro, Martino Gianfranco, McCarthy Andrew A., De Vivo Marco, Marcia Marco. . Targeting the conserved active site of splicing machines with specific and selective small molecule modulators Nature Communications |
| Equivalence Class |
NR_all_35054.12
BGSU version: 4.48 |
| Compound | GDE |
| Residue | . / 401 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | A/A: ribozyme |
| RNA family global | ribozyme |
| Volume | 38.76 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.306 |
| Buriedness | 0.581 |
| Don/acc character | 2.825 |
| SiteScore | 0.613 |
| D Score | 0.275 |
| Kd | — |