Complex 8peg
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 3.30 |
| System mass | 2352.29 kDa |
| Deposition year | 2023 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Escherichia |
| RCSB PDB Entry | 8peg |
| Reference | Flügel Timo, Schacherl Magdalena, Unbehaun Anett, Schroeer Birgit, Dabrowski Marylena, Bürger Jörg, Mielke Thorsten, Sprink Thiemo, Diebolder Christoph A., Guillén Schlippe Yollete V., Spahn Christian M. T.. . Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM Nature Communications |
| Equivalence Class |
NR_all_83717.186
BGSU version: 4.49 |
| Compound | ATP |
| Residue | . / 3193 |
| Chain | VI / 7 |
| Non-redundant | True |
| Interacting RNA chains | H/7 |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | H/7: rRNA |
| RNA family global | rRNA |
| Volume | 84.04 Å3 |
| Hydrophobicity | 0.238 |
| Hydrophilicity | 0.420 |
| Buriedness | 0.468 |
| Don/acc character | 2.751 |
| SiteScore | 0.851 |
| D Score | 0.936 |
| Kd | — |
| Compound | ATP |
| Residue | . / 3194 |
| Chain | WI / 7 |
| Non-redundant | True |
| Interacting RNA chains | H/7 |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | H/7: rRNA |
| RNA family global | rRNA |
| Volume | 92.95 Å3 |
| Hydrophobicity | 0.428 |
| Hydrophilicity | 0.870 |
| Buriedness | 0.579 |
| Don/acc character | 3.297 |
| SiteScore | 0.810 |
| D Score | 0.628 |
| Kd | — |