Complex 8ifb
System information
Experimental technique | Electron Microscopy |
Experimental resolution | 2.43 |
System mass | 2211.26 kDa |
Deposition year | 2023 |
Molecule type | RNA/Protein |
# RNA entities | 6 |
Organism | Escherichia |
RCSB PDB Entry | 8ifb |
Reference | Tomono Junta, Asano Kosuke, Chiashi Takuma, Suzuki Masato, Igarashi Masayuki, Takahashi Yoshiaki, Tanaka Yoshikazu, Yokoyama Takeshi. . Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside The Journal of Biochemistry |
Compound | 84D |
Residue | . / 1738 |
Chain | KG / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 1739 |
Chain | LG / A |
Non-redundant | True |
Interacting RNA chains | A/A |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3255 |
Chain | RQ / a |
Non-redundant | True |
Interacting RNA chains | A/A, V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3256 |
Chain | SQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3257 |
Chain | TQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3258 |
Chain | UQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3260 |
Chain | WQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3261 |
Chain | XQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | 84D |
Residue | . / 3262 |
Chain | YQ / a |
Non-redundant | True |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |
Compound | SPM |
Residue | . / 3180 |
Chain | UN / a |
Non-redundant | False |
Interacting RNA chains | V/a |
Volume | - |
Hydrophobicity | - |
Hydrophilicity | - |
Buriedness | - |
Don/acc character | - |
SiteScore | - |
D Score | - |