Complex 8i3z
System information
Experimental technique | X-ray |
Experimental resolution | 1.67 |
System mass | 18.60 kDa |
Deposition year | 2023 |
Molecule type | RNA |
# RNA entities | 1 |
Organism | Streptococcus |
RCSB PDB Entry | 8i3z |
Reference | Peng Xuemei, Liao Wenjian, Lin Xiaowei, Lilley David M J, Huang Lin. . Crystal structures of the NAD+-II riboswitch reveal two distinct ligand-binding pockets Nucleic Acids Research |
Compound | NMN |
Residue | . / 101 |
Chain | D / B |
Non-redundant | True |
Interacting RNA chains | B/B, A/A |
Volume | 163.95 Å3 |
Hydrophobicity | 0.358 |
Hydrophilicity | 1.028 |
Buriedness | 0.683 |
Don/acc character | 3.948 |
SiteScore | 0.873 |
D Score | 0.862 |
Compound | NMN |
Residue | . / 102 |
Chain | E / B |
Non-redundant | False |
Interacting RNA chains | B/B, A/A |
Volume | 264.45 Å3 |
Hydrophobicity | 0.123 |
Hydrophilicity | 1.390 |
Buriedness | 0.668 |
Don/acc character | 1.795 |
SiteScore | 0.980 |
D Score | 0.888 |