HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8jy0

System information

Experimental technique X-ray
Experimental resolution 2.75
System mass 100.11 kDa
Deposition year 2023
Molecule type RNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 8jy0
Reference Zhang Yufan, Xu Zhonghe, Xiao Yu, Jiang Haodong, Zuo Xiaobing, Li Xing, Fang Xianyang. . Structural mechanisms for binding and activation of a contact-quenched fluorophore by RhoBAST Nature Communications

Compound V8C
Residue . / 203
Chain O / D
Non-redundant True
Interacting RNA chains E/D
Volume 82.66 Å3
Hydrophobicity 1.124
Hydrophilicity 0.681
Buriedness 0.559
Don/acc character 3.139
SiteScore 0.701
D Score 0.701

Compound V8C
Residue . / 101
Chain Q / F
Non-redundant False
Interacting RNA chains F/F
Volume 76.49 Å3
Hydrophobicity 1.043
Hydrophilicity 0.700
Buriedness 0.581
Don/acc character 2.517
SiteScore 0.669
D Score 0.652