HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 8khh

System information

Experimental technique X-ray
Experimental resolution 2.30
System mass 46.21 kDa
Deposition year 2023
Molecule type RNA
# RNA entities 1
Organism Bacillus
RCSB PDB Entry 8khh
Reference Chen Ke, Liao Wenjian, Wang Jiali, Ren Yangyi, Lu Zhizhong, Peng Xuemei, Wang Jia, Huang Lin. . Crystal structures reveal the distinct features of the 2′-dG-III riboswitch in the purine riboswitch family Nucleic Acids Research

Compound GMP
Residue . / 101
Chain C / A
Non-redundant True
Interacting RNA chains A/A
Volume 379.36 Å3
Hydrophobicity 0.213
Hydrophilicity 1.154
Buriedness 0.718
Don/acc character 1.278
SiteScore 1.163
D Score 0.995

Compound GMP
Residue . / 101
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 428.75 Å3
Hydrophobicity 0.152
Hydrophilicity 1.144
Buriedness 0.744
Don/acc character 1.269
SiteScore 1.180
D Score 1.013