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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1146 RNA-SM complexes found
Structure of complex 7e9e

7e9e

Crystal structure of a class I PreQ1 riboswitch aptamer (ab13-14) complexed with a cognate ligand-derived photoaffinity probe

SM: J0C

Structure of complex 7e9i

7e9i

Crystal structure of a class I PreQ1 riboswitch aptamer (wild-type) complexed with a cognate ligand-derived photoaffinity probe

SM: J0C

Structure of complex 7eaf

7eaf

Crystal structure of SAM-I riboswitch with the Actinomyces-1 k-turn

SM: SAM

Structure of complex 7edl

7edl

Crystal structure of the bacterial ribosomal decoding site in complex with G418 and Hg(II)

SM: GET GET

Structure of complex 7edm

7edm

Crystal structure of the eukaryotic ribosomal decoding site in complex with G418 and Hg(II)

SM: GET GET

Structure of complex 7edt

7edt

RNA duplex containing CC mispairs

SM: SPM

Structure of complex 7elp

7elp

Crystal structure of xanthine riboswitch with xanthine, iridium hexammine soak

SM: GTP

Structure of complex 7eog

7eog

Crystal structure of the Pepper aptamer in complex with HBC, iridium hexammine soak

SM: J8F

Structure of complex 7eoh

7eoh

Crystal structure of the Pepper aptamer in complex with HBC

SM: J8F

Structure of complex 7eoi

7eoi

Crystal structure of the Pepper aptamer in complex with HBC, manganese soak

SM: J8F

Structure of complex 7eoj

7eoj

Crystal structure of the Pepper aptamer in complex with HBC, cesium soak

SM: J8F

Structure of complex 7eok

7eok

Crystal structure of the Pepper aptamer in complex with HBC485

SM: J8L

Structure of complex 7eol

7eol

Crystal structure of the Pepper aptamer in complex with HBC497

SM: J8O

Structure of complex 7eom

7eom

Crystal structure of the Pepper aptamer in complex with HBC508

SM: J8R

Structure of complex 7eon

7eon

Crystal structure of the Pepper aptamer in complex with HBC514

SM: J8U

Structure of complex 7eoo

7eoo

Crystal structure of the Pepper aptamer in complex with HBC525

SM: J8X

Structure of complex 7eop

7eop

Crystal structure of the Pepper aptamer in complex with HBC620

SM: J93

Structure of complex 7fhi

7fhi

Interaction between a fluoroquinolone derivative and RNAs with a single bulge

SM: 53D

Structure of complex 7fj0

7fj0

Interaction between a fluoroquinolone derivative and RNAs with a single bulge

SM: 53D

Structure of complex 7k00

7k00

Structure of the Bacterial Ribosome at 2 Angstrom Resolution

SM: PAR SPM

Structure of complex 7kuk

7kuk

High resolution RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7kum

7kum

LNA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7kun

7kun

2'-F modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7kuo

7kuo

FANA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7kup

7kup

2'-OMe modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7kvt

7kvt

Crystal structure of Squash RNA aptamer in complex with DFHBI-1T with iridium (III) ions

SM: 2ZY

Structure of complex 7kvu

7kvu

Crystal structure of Squash RNA aptamer in complex with DFHBI-1T

SM: 2ZY

Structure of complex 7kvv

7kvv

Crystal structure of Squash RNA aptamer in complex with DFHBI-1T

SM: 747

Structure of complex 7l0z

7l0z

Spinach variant bound to DFHBI-1T

SM: 2ZY SPM SPM SPM

Structure of complex 7lh5

7lh5

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

SM: EDS EDS

Structure of complex 7lne

7lne

ANA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7lnf

7lnf

3'-deoxy modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7lng

7lng

TNA modification at 3' end of RNA primer complex with guanosine dinucleotide ligand G(5')ppp(5')G

SM: GP3 GP3

Structure of complex 7m4u

7m4u

A. baumannii Ribosome-Eravacycline complex: 30S

SM: YQM

Structure of complex 7m4w

7m4w

A. baumannii Ribosome-Eravacycline complex: Empty 70S

SM: YQM YQM YQM

Structure of complex 7m4x

7m4x

A. baumannii Ribosome-Eravacycline complex: P-site tRNA 70S

SM: YQM YQM YQM

Structure of complex 7m4y

7m4y

A. baumannii Ribosome-Eravacycline complex: E-site tRNA 70S

SM: YQM YQM YQM

Structure of complex 7md7

7md7

Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolution

SM: ARG ARG YXM YXM

Structure of complex 7mkt

7mkt

Crystal structure of r(GU)11G-NMM complex

SM: MMP

Structure of complex 7n1p

7n1p

Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformation

SM: ATP ATP ATP

Structure of complex 7n2c

7n2c

Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)

SM: ATP ATP FUA

Structure of complex 7n2u

7n2u

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

SM: ATP ATP

Structure of complex 7n2v

7n2v

Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)

SM: ATP ATP GTP SCM SCM SCM

Structure of complex 7n30

7n30

Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformation

SM: ATP ATP

Structure of complex 7n31

7n31

Elongating 70S ribosome complex in a post-translocation (POST) conformation

SM: ATP ATP

Structure of complex 7nqh

7nqh

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

SM: 5GP 5GP SPM SPM SPM

Structure of complex 7nql

7nql

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

SM: 5GP 5GP SPM SPM SPM

Structure of complex 7nsi

7nsi

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

SM: 5GP SPM SPM SPM

Structure of complex 7nsj

7nsj

55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*)

SM: 5GP SPM SPM SPM

Structure of complex 7o7y

7o7y

Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (high resolution)

SM: SPM SPM SPM

Structure of complex 7o7z

7o7z

Rabbit 80S ribosome stalled close to the mutated SARS-CoV-2 slippery site by a pseudoknot (classified for pseudoknot)

SM: SPM SPM SPM

Structure of complex 7oa3

7oa3

Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form)

SM: V5Z V5Z

Structure of complex 7oav

7oav

Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form)

SM: GTP V5Z V5Z V5Z V5Z

Structure of complex 7oaw

7oaw

Crystal structure of the Chili RNA aptamer in complex with DMHBI+

SM: GTP GTP SPM V6T V6T V6T V6T

Structure of complex 7oax

7oax

Crystal structure of the Chili RNA aptamer in complex with DMHBO+

SM: SPM SPM SPM SPM V5Z V5Z V5Z V5Z

Structure of complex 7oiz

7oiz

Cryo-EM structure of 70S ribosome stalled with TnaC peptide

SM: PAR TRP

Structure of complex 7ood

7ood

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

SM: CLM

Structure of complex 7otc

7otc

Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin B

SM: ATP

Structure of complex 7p2e

7p2e

Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin

SM: 5I0 NAD SPM

Structure of complex 7p3k

7p3k

Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)

SM: CLM