Complex 7m4y
System information
| Experimental technique | Electron Microscopy |
| Experimental resolution | 2.50 |
| System mass | 2167.30 kDa |
| Deposition year | 2021 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Acinetobacter |
| RCSB PDB Entry | 7m4y |
| Reference | Zhang Zhemin, Morgan Christopher E., Bonomo Robert A., Yu Edward W.. . Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii mBio |
| Equivalence Class |
NR_all_43481.6,
NR_all_96169.5
BGSU version: 4.48 |
| Compound | YQM |
| Residue | . / 3201 |
| Chain | CB / A |
| Non-redundant | True |
| Interacting RNA chains | E/A |
| RNA environment detailled | ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | E/A: rRNA |
| RNA family global | rRNA |
| Volume | 426.01 Å3 |
| Hydrophobicity | 0.025 |
| Hydrophilicity | 1.788 |
| Buriedness | 0.674 |
| Don/acc character | 0.939 |
| SiteScore | 1.134 |
| D Score | 0.762 |
| Kd | — |
| Compound | YQM |
| Residue | . / 3202 |
| Chain | DB / A |
| Non-redundant | True |
| Interacting RNA chains | E/A |
| RNA environment detailled | ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | E/A: rRNA |
| RNA family global | rRNA |
| Volume | 222.95 Å3 |
| Hydrophobicity | 0.029 |
| Hydrophilicity | 1.532 |
| Buriedness | 0.699 |
| Don/acc character | 1.197 |
| SiteScore | 0.957 |
| D Score | 0.611 |
| Kd | — |
| Compound | YQM |
| Residue | . / 1601 |
| Chain | PG / a |
| Non-redundant | True |
| Interacting RNA chains | EA/a |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | EA/a: rRNA |
| RNA family global | rRNA |
| Volume | 184.53 Å3 |
| Hydrophobicity | 0.177 |
| Hydrophilicity | 1.215 |
| Buriedness | 0.743 |
| Don/acc character | 3.117 |
| SiteScore | 0.658 |
| D Score | 0.590 |
| Kd | — |