HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7nqh

System information

Experimental technique Electron Microscopy
Experimental resolution 3.50
System mass 3121.26 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Sus
RCSB PDB Entry 7nqh
Reference Kummer Eva, Schubert Katharina Noel, Schoenhut Tanja, Scaiola Alain, Ban Nenad. . Structural basis of translation termination, rescue, and recycling in mammalian mitochondria Molecular Cell

Compound 5GP
Residue . / 1791
Chain BP / BA
Non-redundant True
Interacting RNA chains OC/BA
Volume 349.86 Å3
Hydrophobicity 0.194
Hydrophilicity 1.125
Buriedness 0.672
Don/acc character 2.175
SiteScore 1.133
D Score 0.977

Compound 5GP
Residue . / 1792
Chain CP / BA
Non-redundant True
Interacting RNA chains OC/BA
Volume 360.49 Å3
Hydrophobicity 0.274
Hydrophilicity 1.807
Buriedness 0.656
Don/acc character 0.368
SiteScore 1.122
D Score 0.744

Compound SPM
Residue . / 3001
Chain GD / AA
Non-redundant True
Interacting RNA chains AB/AA
Volume 757.34 Å3
Hydrophobicity 0.131
Hydrophilicity 1.377
Buriedness 0.760
Don/acc character 1.503
SiteScore 1.191
D Score 0.947

Compound SPM
Residue . / 1793
Chain DP / BA
Non-redundant True
Interacting RNA chains OC/BA
Volume 648.27 Å3
Hydrophobicity 0.289
Hydrophilicity 1.194
Buriedness 0.809
Don/acc character 2.144
SiteScore 1.074
D Score 1.036

Compound SPM
Residue . / 1794
Chain EP / BA
Non-redundant True
Interacting RNA chains OC/BA
Volume 533.02 Å3
Hydrophobicity 0.146
Hydrophilicity 1.133
Buriedness 0.746
Don/acc character 1.285
SiteScore 1.032
D Score 1.018