HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7nql

System information

Experimental technique Electron Microscopy
Experimental resolution 3.40
System mass 3100.50 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Sus
RCSB PDB Entry 7nql
Reference Kummer Eva, Schubert Katharina Noel, Schoenhut Tanja, Scaiola Alain, Ban Nenad. . Structural basis of translation termination, rescue, and recycling in mammalian mitochondria Molecular Cell

Compound 5GP
Residue . / 3211
Chain SK / BA
Non-redundant True
Interacting RNA chains D/BA
Volume 361.52 Å3
Hydrophobicity 0.204
Hydrophilicity 0.998
Buriedness 0.656
Don/acc character 2.316
SiteScore 1.130
D Score 1.008

Compound 5GP
Residue . / 3212
Chain TK / BA
Non-redundant True
Interacting RNA chains D/BA
Volume 275.77 Å3
Hydrophobicity 0.234
Hydrophilicity 1.805
Buriedness 0.651
Don/acc character 0.551
SiteScore 1.119
D Score 0.743

Compound SPM
Residue . / 3213
Chain UK / BA
Non-redundant True
Interacting RNA chains D/BA
Volume 646.56 Å3
Hydrophobicity 0.236
Hydrophilicity 1.276
Buriedness 0.813
Don/acc character 1.702
SiteScore 1.077
D Score 1.012

Compound SPM
Residue . / 3214
Chain VK / BA
Non-redundant True
Interacting RNA chains D/BA
Volume 555.32 Å3
Hydrophobicity 0.160
Hydrophilicity 1.195
Buriedness 0.736
Don/acc character 1.299
SiteScore 1.025
D Score 0.992

Compound SPM
Residue . / 3001
Chain NL / AA
Non-redundant True
Interacting RNA chains UA/AA
Volume 656.16 Å3
Hydrophobicity 0.135
Hydrophilicity 1.151
Buriedness 0.798
Don/acc character 2.713
SiteScore 1.217
D Score 1.044