HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7nsj

System information

Experimental technique Electron Microscopy
Experimental resolution 3.90
System mass 3097.03 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Sus
RCSB PDB Entry 7nsj
Reference Kummer Eva, Schubert Katharina Noel, Schoenhut Tanja, Scaiola Alain, Ban Nenad. . Structural basis of translation termination, rescue, and recycling in mammalian mitochondria Molecular Cell

Compound 5GP
Residue . / 1791
Chain NO / BA
Non-redundant True
Interacting RNA chains AB/BA
Volume 380.39 Å3
Hydrophobicity 0.122
Hydrophilicity 1.870
Buriedness 0.647
Don/acc character 0.436
SiteScore 1.116
D Score 0.719

Compound SPM
Residue . / 3001
Chain FD / AA
Non-redundant True
Interacting RNA chains YA/AA
Volume 601.28 Å3
Hydrophobicity 0.190
Hydrophilicity 1.195
Buriedness 0.798
Don/acc character 2.402
SiteScore 1.217
D Score 1.029

Compound SPM
Residue . / 1792
Chain OO / BA
Non-redundant True
Interacting RNA chains AB/BA
Volume 622.20 Å3
Hydrophobicity 0.318
Hydrophilicity 1.206
Buriedness 0.803
Don/acc character 1.548
SiteScore 1.070
D Score 1.029

Compound SPM
Residue . / 1793
Chain PO / BA
Non-redundant True
Interacting RNA chains AB/BA
Volume 562.52 Å3
Hydrophobicity 0.193
Hydrophilicity 1.199
Buriedness 0.765
Don/acc character 0.886
SiteScore 1.045
D Score 1.008