HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7pjs

System information

Experimental technique Electron Microscopy
Experimental resolution 2.35
System mass 2244.17 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 5
Organism Escherichia
RCSB PDB Entry 7pjs
Reference Petrychenko Valentyn, Peng Bee-Zen, de A. P. Schwarzer Ana C., Peske Frank, Rodnina Marina V., Fischer Niels. . Structural mechanism of GTPase-powered ribosome-tRNA movement Nature Communications

Compound AM2
Residue . / 1684
Chain YO / a
Non-redundant True
Interacting RNA chains HA/a
Volume 53.51 Å3
Hydrophobicity 0.162
Hydrophilicity 0.833
Buriedness 0.614
Don/acc character 2.172
SiteScore 0.515
D Score 0.436

Compound AM2
Residue . / 1685
Chain ZO / a
Non-redundant True
Interacting RNA chains HA/a
Volume 82.32 Å3
Hydrophobicity 0.110
Hydrophilicity 0.912
Buriedness 0.685
Don/acc character 2.851
SiteScore 0.490
D Score 0.379

Compound AM2
Residue . / 1689
Chain DP / a
Non-redundant False
Interacting RNA chains HA/a
Volume 636.95 Å3
Hydrophobicity 0.163
Hydrophilicity 1.131
Buriedness 0.706
Don/acc character 1.736
SiteScore 1.006
D Score 0.995