HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7pjs

System information

Experimental technique Electron Microscopy
Experimental resolution 2.35
System mass 2244.17 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 5
Organism Escherichia
RCSB PDB Entry 7pjs
Reference Petrychenko Valentyn, Peng Bee-Zen, de A. P. Schwarzer Ana C., Peske Frank, Rodnina Marina V., Fischer Niels. . Structural mechanism of GTPase-powered ribosome-tRNA movement Nature Communications

Compound AM2
Residue . / 1684
Chain YO / a
Non-redundant True
Interacting RNA chains HA/a
Volume 45.62 Å3
Hydrophobicity 0.128
Hydrophilicity 0.967
Buriedness 0.618
Don/acc character 3.029
SiteScore 0.482
D Score 0.381

Compound AM2
Residue . / 1685
Chain ZO / a
Non-redundant True
Interacting RNA chains HA/a
Volume 107.36 Å3
Hydrophobicity 0.036
Hydrophilicity 1.084
Buriedness 0.690
Don/acc character 0.725
SiteScore 0.494
D Score 0.358

Compound AM2
Residue . / 1689
Chain DP / a
Non-redundant False
Interacting RNA chains HA/a
Volume 607.80 Å3
Hydrophobicity 0.211
Hydrophilicity 1.263
Buriedness 0.710
Don/acc character 1.012
SiteScore 1.008
D Score 0.954