HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7otc

System information

Experimental technique Electron Microscopy
Experimental resolution 2.90
System mass 2188.66 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 7otc
Reference Wieland Maximiliane, Holm Mikael, Rundlet Emily J., Morici Martino, Koller Timm O., Maviza Tinashe P., Pogorevc Domen, Osterman Ilya A., Müller Rolf, Blanchard Scott C., Wilson Daniel N.. . The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation Proceedings of the National Academy of Sciences
Equivalence Class NR_all_83717.186
BGSU version: 4.49

Compound ATP
Residue . / 3001
Chain KD / A
Non-redundant True
Interacting RNA chains V/A
RNA environment detailled ion
RNA environment global RNA
RNA family chains V/A: rRNA
RNA family global rRNA
Volume 133.43 Å3
Hydrophobicity 0.474
Hydrophilicity 1.118
Buriedness 0.658
Don/acc character 1.424
SiteScore 0.929
D Score 0.721
Kd