Complex 7oaw
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.95 |
| System mass | 72.16 kDa |
| Deposition year | 2021 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 7oaw |
| Reference | Mieczkowski Mateusz, Steinmetzger Christian, Bessi Irene, Lenz Ann-Kathrin, Schmiedel Alexander, Holzapfel Marco, Lambert Christoph, Pena Vladimir, Höbartner Claudia. . Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine Nature Communications |
| Compound | GTP |
| Residue | . / 101 |
| Chain | K / B |
| Non-redundant | True |
| Interacting RNA chains | B/B |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | GTP |
| Residue | . / 102 |
| Chain | Q / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| Volume | - |
| Hydrophobicity | - |
| Hydrophilicity | - |
| Buriedness | - |
| Don/acc character | - |
| SiteScore | - |
| D Score | - |
| Compound | SPM |
| Residue | . / 101 |
| Chain | P / C |
| Non-redundant | False |
| Interacting RNA chains | A/A, C/C |
| Volume | 549.83 Å3 |
| Hydrophobicity | 0.140 |
| Hydrophilicity | 1.177 |
| Buriedness | 0.675 |
| Don/acc character | 2.333 |
| SiteScore | 0.985 |
| D Score | 0.961 |
| Compound | V6T |
| Residue | . / 104 |
| Chain | H / A |
| Non-redundant | False |
| Interacting RNA chains | A/A, C/C |
| Volume | 736.08 Å3 |
| Hydrophobicity | 0.577 |
| Hydrophilicity | 1.094 |
| Buriedness | 0.718 |
| Don/acc character | 1.385 |
| SiteScore | 1.014 |
| D Score | 1.014 |
| Compound | V6T |
| Residue | . / 104 |
| Chain | N / B |
| Non-redundant | True |
| Interacting RNA chains | B/B, D/D |
| Volume | 968.63 Å3 |
| Hydrophobicity | 0.513 |
| Hydrophilicity | 1.084 |
| Buriedness | 0.731 |
| Don/acc character | 1.725 |
| SiteScore | 1.022 |
| D Score | 1.025 |
| Compound | V6T |
| Residue | . / 105 |
| Chain | T / C |
| Non-redundant | False |
| Interacting RNA chains | A/A, C/C |
| Volume | 903.46 Å3 |
| Hydrophobicity | 0.611 |
| Hydrophilicity | 1.047 |
| Buriedness | 0.721 |
| Don/acc character | 1.614 |
| SiteScore | 1.016 |
| D Score | 1.031 |
| Compound | V6T |
| Residue | . / 104 |
| Chain | Y / D |
| Non-redundant | True |
| Interacting RNA chains | B/B, D/D |
| Volume | 719.61 Å3 |
| Hydrophobicity | 0.635 |
| Hydrophilicity | 1.009 |
| Buriedness | 0.722 |
| Don/acc character | 2.138 |
| SiteScore | 1.022 |
| D Score | 1.044 |