HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7n1p

System information

Experimental technique Electron Microscopy
Experimental resolution 2.33
System mass 2255.98 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 7n1p
Reference Rundlet Emily J., Holm Mikael, Schacherl Magdalena, Natchiar S. Kundhavai, Altman Roger B., Spahn Christian M. T., Myasnikov Alexander G., Blanchard Scott C.. . Structural basis of early translocation events on the ribosome Nature

Compound ATP
Residue . / 3001
Chain VF / 23
Non-redundant True
Interacting RNA chains W/23
Volume 71.34 Å3
Hydrophobicity 0.248
Hydrophilicity 0.922
Buriedness 0.501
Don/acc character 1.842
SiteScore 0.716
D Score 0.524

Compound ATP
Residue . / 3002
Chain WF / 23
Non-redundant True
Interacting RNA chains W/23
Volume 30.87 Å3
Hydrophobicity 0.308
Hydrophilicity 1.055
Buriedness 0.573
Don/acc character 0.814
SiteScore 0.437
D Score 0.325

Compound ATP
Residue . / 3003
Chain XF / 23
Non-redundant True
Interacting RNA chains W/23
Volume 165.67 Å3
Hydrophobicity 0.358
Hydrophilicity 1.222
Buriedness 0.641
Don/acc character 1.738
SiteScore 1.001
D Score 0.784