HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 7nsi

System information

Experimental technique Electron Microscopy
Experimental resolution 4.60
System mass 3103.77 kDa
Deposition year 2021
Molecule type RNA/Protein
# RNA entities 1
Organism Sus
RCSB PDB Entry 7nsi
Reference Kummer Eva, Schubert Katharina Noel, Schoenhut Tanja, Scaiola Alain, Ban Nenad. . Structural basis of translation termination, rescue, and recycling in mammalian mitochondria Molecular Cell

Compound 5GP
Residue . / 1792
Chain RO / BA
Non-redundant True
Interacting RNA chains DB/BA
Volume 399.60 Å3
Hydrophobicity 0.146
Hydrophilicity 1.756
Buriedness 0.640
Don/acc character 0.453
SiteScore 1.111
D Score 0.752

Compound SPM
Residue . / 3001
Chain ED / AA
Non-redundant True
Interacting RNA chains ZA/AA
Volume 701.44 Å3
Hydrophobicity 0.138
Hydrophilicity 1.169
Buriedness 0.790
Don/acc character 2.509
SiteScore 1.212
D Score 1.033

Compound SPM
Residue . / 1793
Chain SO / BA
Non-redundant True
Interacting RNA chains DB/BA
Volume 634.21 Å3
Hydrophobicity 0.364
Hydrophilicity 1.196
Buriedness 0.806
Don/acc character 1.535
SiteScore 1.072
D Score 1.034

Compound SPM
Residue . / 1794
Chain TO / BA
Non-redundant True
Interacting RNA chains DB/BA
Volume 547.43 Å3
Hydrophobicity 0.169
Hydrophilicity 1.254
Buriedness 0.764
Don/acc character 0.905
SiteScore 1.044
D Score 0.990