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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1918 RNA-SM complexes found
filters used:  With equivalence class  
Structure of complex 2l1v

2l1v

Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1

SM: PRF

Structure of complex 2l8h

2l8h

Chemical probe bound to HIV TAR RNA

SM: ARG L8H

Structure of complex 2l94

2l94

Structure of the HIV-1 frameshift site RNA bound to a small molecule inhibitor of viral replication

SM: L94

Structure of complex 2lwk

2lwk

Solution structure of small molecule-influenza RNA complex

SM: 0EC

Structure of complex 2m4q

2m4q

NMR structure of E. coli ribosomela decoding site with apramycin

SM: AM2

Structure of complex 2miy

2miy

Solution NMR structure of a preQ1 Class II riboswitch from Streptococcus pneumoniae

SM: PRF

Structure of complex 2mxs

2mxs

Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin

SM: PAR

Structure of complex 2n0j

2n0j

Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex

SM: RIO

Structure of complex 2nz4

2nz4

Structural investigation of the GlmS ribozyme bound to its catalytic cofactor

SM: GLP GLP GLP GLP

Structure of complex 2o3v

2o3v

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with paromamine derivative NB33

SM: N33

Structure of complex 2o3w

2o3w

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycin

SM: PAR

Structure of complex 2o3x

2o3x

Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30

SM: N30

Structure of complex 2o3y

2o3y

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in Presence of Paromamine Derivative NB30

SM: SPM

Structure of complex 2o43

2o43

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide erythromycylamine

SM: ERN

Structure of complex 2o44

2o44

Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin

SM: JOS

Structure of complex 2o45

2o45

Structure of the 23S rRNA of the large ribosomal subunit from Deinococcus Radiodurans in complex with the macrolide RU-69874

SM: RU6

Structure of complex 2oe5

2oe5

1.5 A X-ray crystal structure of Apramycin complex with RNA fragment GGCGUCGCUAGUACCG/GGUACUAAAAGUCGCCC containing the human ribosomal decoding A site: RNA construct with 3'-overhang

SM: AM2

Structure of complex 2oe8

2oe8

1.8 A X-ray crystal structure of Apramycin complex with RNA fragment GGGCGUCGCUAGUACC/CGGUACUAAAAGUCGCC containing the human ribosomal decoding A site: RNA construct with 5'-overhang

SM: AM2

Structure of complex 2ogm

2ogm

The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-571519

SM: G19

Structure of complex 2ogn

2ogn

The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative SB-280080

SM: G80

Structure of complex 2ogo

2ogo

The crystal structure of the large ribosomal subunit from Deinococcus radiodurans complexed with the pleuromutilin derivative retapamulin (SB-275833)

SM: G34

Structure of complex 2otj

2otj

13-deoxytedanolide bound to the large subunit of Haloarcula marismortui

SM: 13T

Structure of complex 2otl

2otl

Girodazole bound to the large subunit of Haloarcula marismortui

SM: GIR

Structure of complex 2pwt

2pwt

Crystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA group

SM: LHA LHA LHA

Structure of complex 2q66

2q66

Structure of Yeast Poly(A) Polymerase with ATP and oligo(A)

SM: ATP

Structure of complex 2qex

2qex

Negamycin Binds to the Wall of the Nascent Chain Exit Tunnel of the 50S Ribosomal Subunit

SM: NEG

Structure of complex 2qwy

2qwy

SAM-II riboswitch bound to S-adenosylmethionine

SM: SAM SAM SAM

Structure of complex 2rd2

2rd2

Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMINYL)-SULFAMOYL]ADENOSINE

SM: QSI

Structure of complex 2re8

2re8

Glutaminyl-tRNA synthetase mutant C229R with bound analog 5'-O-[N-(L-GLUTAMYL)-SULFAMOYL]ADENOSINE

SM: GSU

Structure of complex 2tob

2tob

SOLUTION STRUCTURE OF THE TOBRAMYCIN-RNA APTAMER COMPLEX, NMR, 13 STRUCTURES

SM: 2TB TOA TOC

Structure of complex 2tra

2tra

RESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALS

SM: SPM

Structure of complex 2uu9

2uu9

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin.

SM: PAR

Structure of complex 2uua

2uua

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.

SM: PAR

Structure of complex 2uub

2uub

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.

SM: PAR

Structure of complex 2uuc

2uuc

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin.

SM: PAR

Structure of complex 2uxb

2uxb

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA GGGU in the context of the Thermus thermophilus 30S subunit.

SM: PAR

Structure of complex 2uxc

2uxc

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.

SM: PAR

Structure of complex 2uxd

2uxd

Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA CGGG in the context of the Thermus thermophilus 30S subunit.

SM: PAR

Structure of complex 2vqe

2vqe

Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding

SM: PAR

Structure of complex 2vqf

2vqf

Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding

SM: PAR

Structure of complex 2ydh

2ydh

Crystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAM

SM: SAM

Structure of complex 2ygh

2ygh

SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionine

SM: SAM

Structure of complex 2yie

2yie

Crystal structure of a F. nucleatum FMN riboswitch bound to FMN

SM: FMN

Structure of complex 2z74

2z74

T. tengcongensis glmS ribozyme bound to glucose-6-phosphate

SM: G6P

Structure of complex 2z75

2z75

T. tengcongensis glmS ribozyme bound to glucosamine-6-phosphate

SM: GLP

Structure of complex 2zh6

2zh6

Complex structure of AFCCA with tRNAminiDCU and ATP

SM: ATP

Structure of complex 2zha

2zha

Complex structure of AFCCA with tRNAminiDU and CTP

SM: CTP

Structure of complex 2zxu

2zxu

Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPP

SM: DST

Structure of complex 32nj

32nj

Cryo-EM structure of SKM-M.smegmatis 70S ribosomal complex

SM: A1JAI

Structure of complex 36lc

36lc

RNA-L-G monomer complex

SM: 0G 0G 0G 0G

Structure of complex 36le

36le

RNA-dGMP complex with L-G-terminal primer

SM: DGP DGP DGP DGP DGP DGP DGP DGP

Structure of complex 36lm

36lm

RNA-dGMP complex

SM: DGP DGP DGP DGP

Structure of complex 38jc

38jc

RNA polymerase ribozyme 85h34 replication complex, consensus structure.

SM: APC

Structure of complex 38jd

38jd

RNA polymerase ribozyme 85h34 replication complex, subclass 2 structure

SM: APC

Structure of complex 3akz

3akz

Crystal structure of Thermotoga maritima nondiscriminating glutamyl-tRNA synthetase in complex with tRNAGln and a glutamyl-AMP analog

SM: GSU GSU GSU

Structure of complex 3al0

3al0

Crystal structure of the glutamine transamidosome from Thermotoga maritima in the glutamylation state.

SM: GSU

Structure of complex 3amu

3amu

Crystal structure of the TiaS-tRNA(Ile2)-AMPCPP-agmatine complex

SM: APC

Structure of complex 3avt

3avt

Structure of viral RNA polymerase complex 1

SM: GH3 GH3

Structure of complex 3avw

3avw

Structure of viral RNA polymerase complex 4

SM: GH3

Structure of complex 3avx

3avx

Structure of viral RNA polymerase complex 5

SM: GH3