HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2qwy

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 52.52 kDa
Deposition year 2007
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2qwy
Reference Gilbert Sunny D, Rambo Robert P, Van Tyne Daria, Batey Robert T. . Structure of the SAM-II riboswitch bound to S-adenosylmethionine Nature Structural & Molecular Biology

Compound SAM
Residue . / 100
Chain H / A
Non-redundant False
Interacting RNA chains A/A
Volume 412.63 Å3
Hydrophobicity 0.632
Hydrophilicity 0.877
Buriedness 0.688
Don/acc character 0.977
SiteScore 1.025
D Score 1.067

Compound SAM
Residue . / 300
Chain K / B
Non-redundant True
Interacting RNA chains B/B
Volume 357.75 Å3
Hydrophobicity 0.530
Hydrophilicity 0.774
Buriedness 0.630
Don/acc character 0.732
SiteScore 0.980
D Score 1.032

Compound SAM
Residue . / 500
Chain O / C
Non-redundant False
Interacting RNA chains C/C
Volume 375.58 Å3
Hydrophobicity 0.818
Hydrophilicity 0.779
Buriedness 0.691
Don/acc character 0.996
SiteScore 0.977
D Score 1.012