HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2qwy

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 52.52 kDa
Deposition year 2007
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2qwy
Reference Gilbert Sunny D, Rambo Robert P, Van Tyne Daria, Batey Robert T. . Structure of the SAM-II riboswitch bound to S-adenosylmethionine Nature Structural & Molecular Biology

Compound SAM
Residue . / 100
Chain H / A
Non-redundant False
Interacting RNA chains A/A
Volume 434.92 Å3
Hydrophobicity 0.396
Hydrophilicity 0.874
Buriedness 0.655
Don/acc character 2.089
SiteScore 1.004
D Score 1.048

Compound SAM
Residue . / 300
Chain K / B
Non-redundant False
Interacting RNA chains B/B
Volume 373.53 Å3
Hydrophobicity 0.371
Hydrophilicity 0.895
Buriedness 0.618
Don/acc character 1.820
SiteScore 0.975
D Score 1.019

Compound SAM
Residue . / 500
Chain O / C
Non-redundant True
Interacting RNA chains C/C
Volume 382.10 Å3
Hydrophobicity 0.500
Hydrophilicity 0.802
Buriedness 0.660
Don/acc character 2.226
SiteScore 0.967
D Score 1.006