Harnessing RIBOnucleic acid – Small molecules Structures

Complex 2yie

System information

Experimental technique X-ray
Experimental resolution 2.94
System mass 37.11
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism Fusobacterium
RCSB PDB Entry 2yie
Reference Vicens Quentin, Mondragón Estefanía, Batey Robert T.. . Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection Nucleic Acids Research

Pocket FMN_.:L/1114:Z

Compound FMN
Non-redundant True
Interacting RNA chains A/X, B/Z
Volume 1126.75
Hydrophobicity 0.561
Hydrophilicity 1.332
Buriedness 0.776
Don/acc character 0.431
SiteScore 1.052
D Score 0.971