HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2yie

System information

Experimental technique X-ray
Experimental resolution 2.94
System mass 37.11 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism Fusobacterium
RCSB PDB Entry 2yie
Reference Vicens Quentin, Mondragón Estefanía, Batey Robert T.. . Molecular sensing by the aptamer domain of the FMN riboswitch: a general model for ligand binding by conformational selection Nucleic Acids Research
Equivalence Class NR_all_63890.2
BGSU version: 4.48

Compound FMN
Residue . / 1114
Chain L / Z
Non-redundant True
Interacting RNA chains B/Z, A/X
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/X: riboswitch, B/Z: riboswitch
RNA family global riboswitch
Volume 987.15 Å3
Hydrophobicity 0.576
Hydrophilicity 1.309
Buriedness 0.798
Don/acc character 0.737
SiteScore 1.217
D Score 0.992
Kd