HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2l8h

System information

Experimental technique Solution NMR
Experimental resolution N/A
System mass 9.66 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2l8h
Reference Davidson Amy, Begley Darren W., Lau Carmen, Varani Gabriele. . A Small-Molecule Probe Induces a Conformation in HIV TAR RNA Capable of Binding Drug-Like Fragments Journal of Molecular Biology

Compound ARG
Residue . / 1
Chain B / A
Non-redundant True
Interacting RNA chains A/A
Volume 274.40 Å3
Hydrophobicity 0.234
Hydrophilicity 1.297
Buriedness 0.722
Don/acc character 1.668
SiteScore 1.166
D Score 0.951

Compound L8H
Residue . / 2
Chain C / A
Non-redundant True
Interacting RNA chains A/A
Volume 160.87 Å3
Hydrophobicity 0.260
Hydrophilicity 0.986
Buriedness 0.589
Don/acc character 2.244
SiteScore 0.990
D Score 0.846