HARIBOSS logo

HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

× Close

Combine filters to refine your query. Each filter opens a dialog showing the values available in the data.


87 RNA-SM complexes found
filters used:  With binding affinity values  
Structure of complex 1arj

1arj

ARG-BOUND TAR RNA, NMR

SM: ARG

Structure of complex 1f1t

1f1t

CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE

SM: ROS

Structure of complex 1f27

1f27

CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT

SM: BTN

Structure of complex 1fyp

1fyp

EUKARYOTIC DECODING REGION A-SITE RNA-PAROMOMYCIN COMPLEX

SM: PAR

Structure of complex 1q8n

1q8n

Solution Structure of the Malachite Green RNA Binding Aptamer

SM: MGR

Structure of complex 1ykv

1ykv

Crystal structure of the Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene

SM: DAI DAI

Structure of complex 2au4

2au4

Class I GTP aptamer

SM: GTP

Structure of complex 2be0

2be0

Complex Between Paromomycin Derivative JS5-39 and the 16S-Rrna A-Site.

SM: JS5 JS5

Structure of complex 2bee

2bee

Complex Between Paromomycin derivative JS4 and the 16S-Rrna A Site

SM: JS4 JS4

Structure of complex 2f4s

2f4s

A-site RNA in complex with neamine

SM: XXX

Structure of complex 2f4t

2f4t

Asite RNA + designer antibiotic

SM: AB9

Structure of complex 2f4u

2f4u

Asite RNA + designer antibiotic

SM: AB6

Structure of complex 2g5k

2g5k

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site complexed with Apramycin

SM: AM2 AM2

Structure of complex 2kgp

2kgp

Structural basis for stabilization of the tau pre-mRNA splicing regulatory element by Novantrone (Mitoxantrone)

SM: MIX

Structure of complex 2ktz

2ktz

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

SM: ISH

Structure of complex 2ku0

2ku0

Inhibitor Induced Structural Change in the HCV IRES Domain IIa RNA

SM: ISI

Structure of complex 2kx8

2kx8

NMR structure of stem-loop 4 from the human 7SK snRNA in complex with arginine

SM: ARG

Structure of complex 2l94

2l94

Structure of the HIV-1 frameshift site RNA bound to a small molecule inhibitor of viral replication

SM: L94

Structure of complex 2lwk

2lwk

Solution structure of small molecule-influenza RNA complex

SM: 0EC

Structure of complex 2mxs

2mxs

Solution NMR-structure of the neomycin sensing riboswitch RNA bound to paromomycin

SM: PAR

Structure of complex 2n0j

2n0j

Solution NMR Structure of the 27 nucleotide engineered neomycin sensing riboswitch RNA-ribostamycin complex

SM: RIO

Structure of complex 2o3w

2o3w

Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site in presence of paromomycin

SM: PAR

Structure of complex 2o3x

2o3x

Crystal Structure of the Prokaryotic Ribosomal Decoding Site Complexed with Paromamine Derivative NB30

SM: N30

Structure of complex 2ydh

2ydh

Crystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAM

SM: SAM

Structure of complex 2ygh

2ygh

SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionine

SM: SAM

Structure of complex 3ds7

3ds7

Structure of an RNA-2'-deoxyguanosine complex

SM: GNG GNG

Structure of complex 3e5c

3e5c

Crystal Structure of the SMK box (SAM-III) Riboswitch with SAM

SM: SAM

Structure of complex 3fo4

3fo4

Crystal structure of guanine riboswitch C74U mutant bound to 6-chloroguanine

SM: 6GU

Structure of complex 3fo6

3fo6

Crystal structure of guanine riboswitch bound to 6-O-methylguanine

SM: 6GO

Structure of complex 3fu2

3fu2

Cocrystal structure of a class-I preQ1 riboswitch

SM: PRF PRF PRF

Structure of complex 3ger

3ger

Guanine riboswitch bound to 6-chloroguanine

SM: 6GU

Structure of complex 3ges

3ges

Crystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanine

SM: 6GO

Structure of complex 3gog

3gog

Guanine riboswitch A21G,U75C mutant bound to 6-chloroguanine

SM: 6GU

Structure of complex 3mum

3mum

Crystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMP

SM: C2E

Structure of complex 3mur

3mur

Crystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMP

SM: C2E

Structure of complex 3mxh

3mxh

Native structure of a c-di-GMP riboswitch from V. cholerae

SM: C2E

Structure of complex 3npn

3npn

Structure of the s-adenosylhomocysteine riboswitch at 3.0A

SM: SAH

Structure of complex 3q3z

3q3z

Structure of a c-di-GMP-II riboswitch from C. acetobutylicum bound to c-di-GMP

SM: C2E C2E C2E C2E

Structure of complex 3q50

3q50

Structural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-bound state

SM: PRF

Structure of complex 3slm

3slm

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine-5'-monophosphate

SM: DGP DGP

Structure of complex 4aob

4aob

SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine

SM: SAM

Structure of complex 4jf2

4jf2

Structure of a class II preQ1 riboswitch reveals ligand recognition by a new fold

SM: PRF

Structure of complex 4kqy

4kqy

Bacillus subtilis yitJ S box/SAM-I riboswitch

SM: SAM

Structure of complex 4l81

4l81

Structure of the SAM-I/IV riboswitch (env87(deltaU92, deltaG93))

SM: SAM

Structure of complex 4lvv

4lvv

Structure of the THF riboswitch

SM: FFO FFO

Structure of complex 4lvx

4lvx

Structure of the THF riboswitch bound to tetrahydrobiopterin

SM: H4B H4B

Structure of complex 4lvy

4lvy

Structure of the THF riboswitch bound to pemetrexed

SM: LYA LYA

Structure of complex 4lx5

4lx5

X-ray crystal structure of the M6" riboswitch aptamer bound to pyrimido[4,5-d]pyrimidine-2,4-diamine (PPDA)

SM: 29G

Structure of complex 4lx6

4lx6

X-ray crystal structure of the M6C" riboswitch aptamer bound to 2-aminopyrimido[4,5-d]pyrimidin-4(3H)-one (PPAO)

SM: 29H

Structure of complex 4nya

4nya

Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine

SM: 2QB 2QB

Structure of complex 4nyb

4nyb

Crystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamine

SM: 2QC

Structure of complex 4nyg

4nyg

Crystal structure of the E. coli thiM riboswitch in complex with thiamine

SM: VIB

Structure of complex 4oqu

4oqu

Structure of the SAM-I/IV riboswitch (env87(deltaU92))

SM: SAM

Structure of complex 4qk8

4qk8

Thermoanaerobacter pseudethanolicus c-di-AMP riboswitch

SM: 2BA 2BA

Structure of complex 4qk9

4qk9

Thermovirga lienii c-di-AMP riboswitch

SM: 2BA 2BA

Structure of complex 4qlm

4qlm

ydao riboswitch binding to c-di-AMP

SM: 2BA 2BA

Structure of complex 4qln

4qln

structure of ydao riboswitch binding with c-di-dAMP

SM: 2BA 2BA

Structure of complex 4rzd

4rzd

Crystal Structure of a PreQ1 Riboswitch

SM: PRF

Structure of complex 4ts0

4ts0

Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions

SM: 38E

Structure of complex 4ts2

4ts2

Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions

SM: 38E