HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3fu2

System information

Experimental technique X-ray
Experimental resolution 2.85
System mass 33.40 kDa
Deposition year 2009
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3fu2
Reference Klein Daniel J, Edwards Thomas E, Ferré-D'Amaré Adrian R. . Cocrystal structure of a class I preQ1 riboswitch reveals a pseudoknot recognizing an essential hypermodified nucleobase Nature Structural & Molecular Biology

Compound PRF
Residue . / 101
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 269.25 Å3
Hydrophobicity 0.307
Hydrophilicity 1.288
Buriedness 0.720
Don/acc character 1.382
SiteScore 1.015
D Score 0.952

Compound PRF
Residue . / 101
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 251.08 Å3
Hydrophobicity 0.277
Hydrophilicity 1.243
Buriedness 0.702
Don/acc character 1.277
SiteScore 1.003
D Score 0.956

Compound PRF
Residue . / 101
Chain M / C
Non-redundant False
Interacting RNA chains C/C
Volume 264.11 Å3
Hydrophobicity 0.489
Hydrophilicity 1.241
Buriedness 0.725
Don/acc character 1.837
SiteScore 1.018
D Score 0.970