HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3fu2

System information

Experimental technique X-ray
Experimental resolution 2.85
System mass 33.40 kDa
Deposition year 2009
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3fu2
Reference Klein Daniel J, Edwards Thomas E, Ferré-D'Amaré Adrian R. . Cocrystal structure of a class I preQ1 riboswitch reveals a pseudoknot recognizing an essential hypermodified nucleobase Nature Structural & Molecular Biology

Compound PRF
Residue . / 101
Chain D / A
Non-redundant False
Interacting RNA chains A/A
Volume 265.14 Å3
Hydrophobicity 0.493
Hydrophilicity 1.283
Buriedness 0.741
Don/acc character 0.899
SiteScore 1.028
D Score 0.966

Compound PRF
Residue . / 101
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 246.96 Å3
Hydrophobicity 0.445
Hydrophilicity 1.317
Buriedness 0.736
Don/acc character 0.899
SiteScore 1.025
D Score 0.952

Compound PRF
Residue . / 101
Chain M / C
Non-redundant False
Interacting RNA chains C/C
Volume 257.94 Å3
Hydrophobicity 0.515
Hydrophilicity 1.230
Buriedness 0.730
Don/acc character 1.030
SiteScore 1.021
D Score 0.977