HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3q3z

System information

Experimental technique X-ray
Experimental resolution 2.51
System mass 51.77 kDa
Deposition year 2010
Molecule type RNA
# RNA entities 1
Organism Clostridium
RCSB PDB Entry 3q3z
Reference Smith Kathryn D., Shanahan Carly A., Moore Emily L., Simon Aline C., Strobel Scott A.. . Structural basis of differential ligand recognition by two classes of bis-(3′-5′)-cyclic dimeric guanosine monophosphate-binding riboswitches Proceedings of the National Academy of Sciences

Compound C2E
Residue . / 1
Chain C / V
Non-redundant False
Interacting RNA chains A/V
Volume 530.28 Å3
Hydrophobicity 0.524
Hydrophilicity 1.025
Buriedness 0.662
Don/acc character 1.342
SiteScore 0.979
D Score 1.003

Compound C2E
Residue . / 84
Chain H / V
Non-redundant True
Interacting RNA chains A/V
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -

Compound C2E
Residue . / 2
Chain L / A
Non-redundant True
Interacting RNA chains B/A
Volume 487.75 Å3
Hydrophobicity 0.713
Hydrophilicity 0.888
Buriedness 0.657
Don/acc character 1.283
SiteScore 1.002
D Score 1.044

Compound C2E
Residue . / 84
Chain Q / A
Non-redundant False
Interacting RNA chains B/A
Volume -
Hydrophobicity -
Hydrophilicity -
Buriedness -
Don/acc character -
SiteScore -
D Score -