HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3slm

System information

Experimental technique X-ray
Experimental resolution 2.70
System mass 46.17 kDa
Deposition year 2011
Molecule type RNA
# RNA entities 1
Organism Mesoplasma
RCSB PDB Entry 3slm
Reference Pikovskaya Olga, Polonskaia Anna, Patel Dinshaw J, Serganov Alexander. . Structural principles of nucleoside selectivity in a 2′-deoxyguanosine riboswitch Nature Chemical Biology

Compound DGP
Residue . / 120
Chain C / A
Non-redundant True
Interacting RNA chains A/A
Volume 523.76 Å3
Hydrophobicity 0.228
Hydrophilicity 1.260
Buriedness 0.725
Don/acc character 0.613
SiteScore 1.018
D Score 0.964

Compound DGP
Residue . / 120
Chain L / B
Non-redundant True
Interacting RNA chains B/B
Volume 496.32 Å3
Hydrophobicity 0.286
Hydrophilicity 1.296
Buriedness 0.745
Don/acc character 0.626
SiteScore 1.031
D Score 0.965