HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3ds7

System information

Experimental technique X-ray
Experimental resolution 1.85
System mass 45.51 kDa
Deposition year 2008
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3ds7
Reference Edwards Andrea L., Batey Robert T.. . A Structural Basis for the Recognition of 2′-Deoxyguanosine by the Purine Riboswitch Journal of Molecular Biology
Equivalence Class NR_all_89429.8
BGSU version: 4.48

Compound GNG
Residue . / 120
Chain I / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: unknown
RNA family global unknown
Volume 542.63 Å3
Hydrophobicity 0.116
Hydrophilicity 1.234
Buriedness 0.744
Don/acc character 1.154
SiteScore 1.181
D Score 0.984
Kd 39uM

Compound GNG
Residue . / 320
Chain Q / B
Non-redundant False
Interacting RNA chains B/B
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains B/B: unknown
RNA family global unknown
Volume 547.43 Å3
Hydrophobicity 0.143
Hydrophilicity 1.194
Buriedness 0.704
Don/acc character 1.053
SiteScore 1.154
D Score 0.973
Kd 39uM