Complex 1q8n
System information
| Experimental technique | Solution NMR |
| Experimental resolution | N/A |
| System mass | 12.65 kDa |
| Deposition year | 2003 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1q8n |
| Reference | Flinders Jeremy, DeFina Steven C., Brackett David M., Baugh Chris, Wilson Charles, Dieckmann Thorsten. . Recognition of Planar and Nonplanar Ligands in the Malachite Green–RNA Aptamer Complex ChemBioChem |
| Molecular Dynamics Simulation | mmb-A01WO, mmb-A01WW, mmb-A01XF, mmb-A0227, mmb-A022H |
| Equivalence Class |
NR_all_93156.1
BGSU version: 4.48 |
| Compound | MGR |
| Residue | . / 39 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | A/A: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 670.22 Å3 |
| Hydrophobicity | 0.653 |
| Hydrophilicity | 1.138 |
| Buriedness | 0.723 |
| Don/acc character | 1.370 |
| SiteScore | 1.167 |
| D Score | 1.003 |
| Kd | 800nM |