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Harnessing RIBOnucleic acid - Small molecules Structures

RNA-SM complexes

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1146 RNA-SM complexes found
Structure of complex 3fu2

3fu2

Cocrystal structure of a class-I preQ1 riboswitch

SM: PRF PRF PRF

Structure of complex 3fwo

3fwo

The large ribosomal subunit from Deinococcus radiodurans complexed with Methymycin

SM: MT9

Structure of complex 3g4s

3g4s

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

SM: MUL

Structure of complex 3g6e

3g6e

Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit

SM: HMT

Structure of complex 3g71

3g71

Co-crystal structure of Bruceantin bound to the large ribosomal subunit

SM: WIN

Structure of complex 3g8t

3g8t

Crystal structure of the G33A mutant Bacillus anthracis glmS ribozyme bound to GlcN6P

SM: GLP GLP GLP GLP

Structure of complex 3g96

3g96

Crystal structure of the Bacillus anthracis glmS ribozyme bound to MaN6P

SM: 6MN

Structure of complex 3g9c

3g9c

Crystal structure of the product Bacillus anthracis glmS ribozyme

SM: GLP

Structure of complex 3gca

3gca

The structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domain

SM: PQ0

Structure of complex 3ger

3ger

Guanine riboswitch bound to 6-chloroguanine

SM: 6GU

Structure of complex 3ges

3ges

Crystal structure of the guanine riboswitch C74U mutant bound to 6-O-methylguanine

SM: 6GO

Structure of complex 3gog

3gog

Guanine riboswitch A21G,U75C mutant bound to 6-chloroguanine

SM: 6GU

Structure of complex 3gx2

3gx2

TteSAM-I riboswitch variant A94GU34C bound to sinefungin

SM: SFG

Structure of complex 3gx3

3gx3

Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH

SM: SAH

Structure of complex 3gx5

3gx5

Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM

SM: SAM

Structure of complex 3gx6

3gx6

Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chloride

SM: SAM

Structure of complex 3gx7

3gx7

Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAM

SM: SAM

Structure of complex 3i56

3i56

Co-crystal structure of Triacetyloleandomcyin Bound to the Large Ribosomal Subunit

SM: TAO

Structure of complex 3iqn

3iqn

Free-state structural transitions of the SAM-I riboswitch

SM: SAM

Structure of complex 3iqr

3iqr

SAM-I riboswitch from T. tencongensis variant A94G bound with SAM

SM: SAM

Structure of complex 3irw

3irw

Structure of a c-di-GMP riboswitch from V. cholerae

SM: C2E

Structure of complex 3iwn

3iwn

Co-crystal structure of a bacterial c-di-GMP riboswitch

SM: C2E C2E

Structure of complex 3jq4

3jq4

The structure of the complex of the large ribosomal subunit from D. Radiodurans with the antibiotic lankacidin

SM: LC2

Structure of complex 3k0j

3k0j

Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module

SM: TPP TPP

Structure of complex 3k1v

3k1v

Cocrystal structure of a mutant class-I preQ1 riboswitch

SM: PRF

Structure of complex 3l3c

3l3c

Crystal structure of the Bacillus anthracis glmS ribozyme bound to Glc6P

SM: G6P G6P G6P G6P

Structure of complex 3mij

3mij

Crystal structure of a telomeric RNA G-quadruplex complexed with an acridine-based ligand.

SM: R14

Structure of complex 3mum

3mum

Crystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMP

SM: C2E

Structure of complex 3mur

3mur

Crystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMP

SM: C2E

Structure of complex 3mut

3mut

Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMP

SM: C2E

Structure of complex 3muv

3muv

Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMP

SM: 2BA

Structure of complex 3mxh

3mxh

Native structure of a c-di-GMP riboswitch from V. cholerae

SM: C2E

Structure of complex 3npn

3npn

Structure of the s-adenosylhomocysteine riboswitch at 3.0A

SM: SAH

Structure of complex 3npq

3npq

Structure of the S-adenosylhomocysteine riboswitch at 2.18 A

SM: SAH SAH SAH

Structure of complex 3q3z

3q3z

Structure of a c-di-GMP-II riboswitch from C. acetobutylicum bound to c-di-GMP

SM: C2E C2E C2E C2E

Structure of complex 3q50

3q50

Structural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-bound state

SM: PRF

Structure of complex 3rkf

3rkf

Crystal structure of guanine riboswitch C61U/G37A double mutant bound to thio-guanine

SM: DX4 DX4 DX4 DX4

Structure of complex 3s4p

3s4p

Crystal structure of the bacterial ribosomal decoding site complexed with an amphiphilic paromomycin O2''-ether analogue

SM: JS6 JS6

Structure of complex 3sd3

3sd3

The structure of the tetrahydrofolate riboswitch containing a U25C mutation

SM: FFO

Structure of complex 3ski

3ski

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine

SM: GNG GNG

Structure of complex 3skl

3skl

Crystal structure of the 2'- deoxyguanosine riboswitch bound to 2'-deoxyguanosine, iridium hexammine soak

SM: GNG GNG

Structure of complex 3skr

3skr

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cobalt Hexammine soak

SM: GNG GNG

Structure of complex 3skt

3skt

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, manganese Soak

SM: GNG GNG

Structure of complex 3skw

3skw

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'- Deoxyguanosine, cesium soak

SM: GNG GNG

Structure of complex 3skz

3skz

Crystal structure of the 2'- deoxyguanosine riboswitch bound to guanosine

SM: GMP GMP

Structure of complex 3slm

3slm

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to 2'-deoxyguanosine-5'-monophosphate

SM: DGP DGP

Structure of complex 3slq

3slq

Crystal structure of the 2'- Deoxyguanosine riboswitch bound to guanosine-5'-monophosphate

SM: 5GP 5GP

Structure of complex 3suh

3suh

Crystal structure of THF riboswitch, bound with 5-formyl-THF

SM: FFO

Structure of complex 3sux

3sux

Crystal structure of THF riboswitch, bound with THF

SM: THF

Structure of complex 3t1h

3t1h

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

SM: PAR

Structure of complex 3t1y

3t1y

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin

SM: PAR

Structure of complex 3td1

3td1

Crystal structure of the bacterial A1408G-mutant and the protozoa cytoplasmic ribosomal decoding site in complex with geneticin

SM: GET GET

Structure of complex 3tzr

3tzr

Structure of a Riboswitch-like RNA-ligand complex from the Hepatitis C Virus Internal Ribosome Entry Site

SM: SS0

Structure of complex 3v7e

3v7e

Crystal structure of YbxF bound to the SAM-I riboswitch aptamer

SM: SAM SAM

Structure of complex 3wru

3wru

Crystal structure of the bacterial ribosomal decoding site in complex with synthetic aminoglycoside with F-HABA group

SM: SJP SJP

Structure of complex 4aob

4aob

SAM-I riboswitch containing the T. solenopsae Kt-23 in complex with S- adenosyl methionine

SM: SAM

Structure of complex 4aqy

4aqy

Structure of ribosome-apramycin complexes

SM: AM2 AM2 AM2 AM2 AM2

Structure of complex 4b5r

4b5r

SAM-I riboswitch bearing the H. marismortui K-t-7

SM: SAM

Structure of complex 4dr2

4dr2

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with multiple copies of paromomycin molecules bound

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR

Structure of complex 4dr4

4dr4

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules bound

SM: PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR PAR