HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3g8t

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 245.79 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 2
Organism N/A
RCSB PDB Entry 3g8t
Reference Cochrane Jesse C., Lipchock Sarah V., Smith Kathryn D., Strobel Scott A.. . Structural and Chemical Basis for Glucosamine 6-Phosphate Binding and Activation of the glmS Ribozyme Biochemistry

Compound GLP
Residue . / 5001
Chain M / E
Non-redundant False
Interacting RNA chains B/E, C/P
Volume 385.19 Å3
Hydrophobicity 0.124
Hydrophilicity 1.330
Buriedness 0.716
Don/acc character 1.021
SiteScore 1.012
D Score 0.936

Compound GLP
Residue . / 5002
Chain R / Q
Non-redundant False
Interacting RNA chains E/F, F/Q
Volume 533.36 Å3
Hydrophobicity 0.110
Hydrophilicity 1.436
Buriedness 0.754
Don/acc character 1.138
SiteScore 1.037
D Score 0.924

Compound GLP
Residue . / 5003
Chain V / R
Non-redundant False
Interacting RNA chains I/R, H/G
Volume 387.93 Å3
Hydrophobicity 0.008
Hydrophilicity 1.435
Buriedness 0.754
Don/acc character 1.157
SiteScore 1.038
D Score 0.925

Compound GLP
Residue . / 5004
Chain Z / H
Non-redundant False
Interacting RNA chains K/H, L/S
Volume 402.00 Å3
Hydrophobicity 0.077
Hydrophilicity 1.415
Buriedness 0.738
Don/acc character 0.992
SiteScore 1.027
D Score 0.921