Complex 3g8t
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.00 |
| System mass | 245.79 kDa |
| Deposition year | 2009 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 3g8t |
| Reference | Cochrane Jesse C., Lipchock Sarah V., Smith Kathryn D., Strobel Scott A.. . Structural and Chemical Basis for Glucosamine 6-Phosphate Binding and Activation of the glmS Ribozyme Biochemistry |
| Compound | GLP |
| Residue | . / 5001 |
| Chain | M / E |
| Non-redundant | True |
| Interacting RNA chains | C/P, B/E |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | B/E: ribozyme, C/P: ribozyme |
| RNA family global | ribozyme |
| Volume | 375.24 Å3 |
| Hydrophobicity | 0.092 |
| Hydrophilicity | 1.597 |
| Buriedness | 0.711 |
| Don/acc character | 0.941 |
| SiteScore | 1.159 |
| D Score | 0.846 |
| Kd | — |
| Compound | GLP |
| Residue | . / 5002 |
| Chain | R / Q |
| Non-redundant | True |
| Interacting RNA chains | F/Q, E/F |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | E/F: ribozyme, F/Q: ribozyme |
| RNA family global | ribozyme |
| Volume | 457.56 Å3 |
| Hydrophobicity | 0.195 |
| Hydrophilicity | 1.805 |
| Buriedness | 0.775 |
| Don/acc character | 0.702 |
| SiteScore | 1.201 |
| D Score | 0.817 |
| Kd | — |
| Compound | GLP |
| Residue | . / 5003 |
| Chain | V / R |
| Non-redundant | True |
| Interacting RNA chains | I/R, H/G |
| RNA environment detailled | ion |
| RNA environment global | RNA |
| RNA family chains | H/G: ribozyme, I/R: ribozyme |
| RNA family global | ribozyme |
| Volume | 382.10 Å3 |
| Hydrophobicity | 0.022 |
| Hydrophilicity | 2.107 |
| Buriedness | 0.763 |
| Don/acc character | 0.712 |
| SiteScore | 1.194 |
| D Score | 0.711 |
| Kd | — |
| Compound | GLP |
| Residue | . / 5004 |
| Chain | Z / H |
| Non-redundant | True |
| Interacting RNA chains | L/S, K/H |
| RNA environment detailled | RNA-only |
| RNA environment global | RNA |
| RNA family chains | K/H: ribozyme, L/S: ribozyme |
| RNA family global | ribozyme |
| Volume | 403.71 Å3 |
| Hydrophobicity | 0.094 |
| Hydrophilicity | 1.276 |
| Buriedness | 0.740 |
| Don/acc character | 1.045 |
| SiteScore | 1.178 |
| D Score | 0.968 |
| Kd | — |