HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3g8t

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 245.79 kDa
Deposition year 2009
Molecule type RNA/Protein
# RNA entities 2
Organism N/A
RCSB PDB Entry 3g8t
Reference Cochrane Jesse C., Lipchock Sarah V., Smith Kathryn D., Strobel Scott A.. . Structural and Chemical Basis for Glucosamine 6-Phosphate Binding and Activation of the glmS Ribozyme Biochemistry

Compound GLP
Residue . / 5001
Chain M / E
Non-redundant False
Interacting RNA chains C/P, B/E
Volume 401.65 Å3
Hydrophobicity 0.188
Hydrophilicity 1.328
Buriedness 0.727
Don/acc character 0.714
SiteScore 1.019
D Score 0.943

Compound GLP
Residue . / 5002
Chain R / Q
Non-redundant False
Interacting RNA chains F/Q, E/F
Volume 520.33 Å3
Hydrophobicity 0.219
Hydrophilicity 1.371
Buriedness 0.759
Don/acc character 0.839
SiteScore 1.041
D Score 0.949

Compound GLP
Residue . / 5003
Chain V / R
Non-redundant False
Interacting RNA chains H/G, I/R
Volume 371.47 Å3
Hydrophobicity 0.155
Hydrophilicity 1.544
Buriedness 0.776
Don/acc character 0.785
SiteScore 1.052
D Score 0.903

Compound GLP
Residue . / 5004
Chain Z / H
Non-redundant False
Interacting RNA chains L/S, K/H
Volume 398.57 Å3
Hydrophobicity 0.156
Hydrophilicity 1.422
Buriedness 0.757
Don/acc character 0.719
SiteScore 1.039
D Score 0.931